Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi207g00125 ATTGCAGTGAAAAGATTTAAAGTTTGGAGCAACAAAGCAGAGAGGGAATTTGCTGTTGAAGTTGAAATATTGGCGAGAGTACAGCACAAGAATCTTCTTGGTCTACGTGGCTATTGTGCTGAAGGACAGGAACGATATCTTCACCACCAAGCAACACCACGTATCATCCACAGGGATATCAAAGCAAGCAATGTGTTACTGGATTCAGATTTTCAGGCCCGGGTTGCTGATTTTGGATTTGCCAAGTTGATCCCTGATGGGGCAACGCATGTGACTACAAATGTTAAGGGTACCCTGGGCTACCTTGCACCAGAATATGCCATGTTTGGTAAAACAAATGAGAGTTGTGACGTCTACAGTTTCGGTATTCTCCTTCTAGAACTGGCCAGTGGCAGAAAACCAATTGAAAAGCTTAGCTCCACAGTGAAGATTTCAATAGTTGATTGGGCATTGCCATTGGTTTGTGAGAAGAAATTTAGTGAACTTGCTGATCCAAGACTAAATGGTAACTATGTGGAGGAAGAGCTTAAAAGGGTTATTATAGTTGCATTGGTATGTGTTCAGGACCTACCTGAGAAGAGACCCACCATGCTTGATGTGGTAGAGCTACTGAAGGGAGAATCTAAAGATAAATTTTCTCATATAGAGAATAGTGAAATGTTTAGAAGCCCTCTAGCTGTAGAATACAATGATGGGACATCAGTGGCTGAAGACTGTTTAGACTTCATCTCAGGAGAAAAAGAATTAAAGCATGAGTTGAAAGAGGATACTAAGCTATGA 780 0.4128 IAVKRFKVWSNKAEREFAVEVEILARVQHKNLLGLRGYCAEGQERYLHHQATPRIIHRDIKASNVLLDSDFQARVADFGFAKLIPDGATHVTTNVKGTLGYLAPEYAMFGKTNESCDVYSFGILLLELASGRKPIEKLSSTVKISIVDWALPLVCEKKFSELADPRLNGNYVEEELKRVIIVALVCVQDLPEKRPTMLDVVELLKGESKDKFSHIENSEMFRSPLAVEYNDGTSVAEDCLDFISGEKELKHELKEDTKL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi207g00125 259 Gene3D Phosphorylase Kinase; domain 1 1 46 - -
Sebi207g00125 259 ProSitePatterns Serine/Threonine protein kinases active-site signature. 55 67 IPR008271 GO:0004672|GO:0006468
Sebi207g00125 259 Gene3D Transferase(Phosphotransferase) domain 1 47 222 - -
Sebi207g00125 259 Pfam Protein kinase domain 45 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi207g00125 259 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi207g00125 259 SUPERFAMILY Protein kinase-like (PK-like) 1 204 IPR011009 -
Sebi207g00125 259 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 36 211 - -
Sebi207g00125 259 SMART serkin_6 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi207g00125 259 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi207g00125 Sebi-Chr207 1389184 1390170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi207g00125 1 200 Trihelix Transcription Factor Family AT1G68690 42.213 2.82e-59 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Sebi207g00125 Pkinase 8.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi207g00125 - - gmx:100791193 414.461