Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi207g00098 ATGTTTTTAGAAGTCGTTGATGTCGCGACTGTCATCGGCGTCGACGAGGTTCTTGAGGGCGGATTCATCGGCGTCCGAATTCTAGCCGAAGCCGGCGCGAATCTGGACCACCGTGACAACGCCGGCGGCCTGACAGCGCTGCACATGGCGGCGGGGTACGTGAGGCCTAGCGTGGCGAAGCTGCTTCTGGAGCTCGGAGCGGAACCTGAGGTAGAAGATTATTGCGGAAAGACGCCGCTGGATCTGGCGAGGGAGATTCTGAAGGCGACGCCGAAGGGGAACCCGATGGTTTTGGAAGGTGCGATTTTCGAGTACACAGAGGTGGAAGAGATTTTGGAAGAGATGGGGGAGGGTGAGAATTTGGAGTACCTTGTGCGGTGGAAGGATGGTGGTGCAAACGAGTGGATGAAAGCGAAGTTTGTGGCGGAGGATTTGGTGAAGAACTACGAGGTTGGGGCTTGA 462 0.5671 MFLEVVDVATVIGVDEVLEGGFIGVRILAEAGANLDHRDNAGGLTALHMAAGYVRPSVAKLLLELGAEPEVEDYCGKTPLDLAREILKATPKGNPMVLEGAIFEYTEVEEILEEMGEGENLEYLVRWKDGGANEWMKAKFVAEDLVKNYEVGA 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi207g00098 153 Gene3D - 101 152 - -
Sebi207g00098 153 ProSiteProfiles Ankyrin repeat region circular profile. 42 73 - -
Sebi207g00098 153 Pfam Ankyrin repeats (many copies) 28 83 IPR002110 GO:0005515
Sebi207g00098 153 SUPERFAMILY Ankyrin repeat 25 85 IPR036770 -
Sebi207g00098 153 PANTHER MYOTROPHIN 25 118 - -
Sebi207g00098 153 Gene3D - 17 100 IPR036770 -
Sebi207g00098 153 SUPERFAMILY Chromo domain-like 104 150 IPR016197 -
Sebi207g00098 153 ProSiteProfiles Ankyrin repeat profile. 42 74 IPR002110 GO:0005515
Sebi207g00098 153 SMART ANK_2a 42 71 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi207g00098 Sebi-Chr207 1049680 1050890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi207g00098 19 80 MAP Kinase Kinase Kinase AT3G58760 41.935 2.84e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi207g00098 K12271 - gmx:100818382 193.741