Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi207g00097 ATGGAGGAGTCAGGGGAAAATTGGCCTTCTGATTCTGATCTGGAAGCGGGTGATGACGTCAACGATGATTTCTATTTGGATGATGAAGAATTTGGTGACGAAGACGGTTATTCTGTTACTGAGACTGTAGATCCCATGGCGGGAGAGGGAGAGACTGACAGAAAAGGAAGACAGACGGAACTCACTGAGAGATTGCTTGCACTTTCGGCCGCCATACCCGGCTTGAAGAAGACGGATGACACTTCCATCCTGGACAAAGCTAGCAAATATGTGAAACAACTTCAAGAACGTGTGAGAGAGTTAGAACAAGAAATTGAATCCCACGATTGTAGCAACAAAGGCACCACCTCTTGCGAAGTGAGCTCTGTTTACTATAGTGGTGGAACGAATGAAACTCTGCCTGAAGTCAAAGCAAGAGTGTTACAGAGGGAAGTACTGGTCATCATCCACTGTGAGAGACAAAAGGGCCTTATGCTCAAAATACTCTCCCACCTTGAAAATCTTCATCTCTCTGTAGTCAACAGCAGTGTCTTGCGATTCGGAAAATCCACTCTTGACATCACCATCGTTGCTCAGATGGGAGATGGATACAACATGACAGTGGATGAACTAGTGAAAACCCTGAGAGTAGCTATCTTGACACAATAG 648 0.4537 MEESGENWPSDSDLEAGDDVNDDFYLDDEEFGDEDGYSVTETVDPMAGEGETDRKGRQTELTERLLALSAAIPGLKKTDDTSILDKASKYVKQLQERVRELEQEIESHDCSNKGTTSCEVSSVYYSGGTNETLPEVKARVLQREVLVIIHCERQKGLMLKILSHLENLHLSVVNSSVLRFGKSTLDITIVAQMGDGYNMTVDELVKTLRVAILTQ 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi207g00097 215 MobiDBLite consensus disorder prediction 1 37 - -
Sebi207g00097 215 MobiDBLite consensus disorder prediction 1 58 - -
Sebi207g00097 215 Coils Coil 84 111 - -
Sebi207g00097 215 PANTHER BHLH TRANSCRIPTION FACTOR 53 213 - -
Sebi207g00097 215 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 55 110 IPR036638 GO:0046983
Sebi207g00097 215 Gene3D - 51 110 IPR036638 GO:0046983
Sebi207g00097 215 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 94 IPR011598 GO:0046983
Sebi207g00097 215 SMART finulus 50 100 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi207g00097 Sebi-Chr207 1030568 1034297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi207g00097 53 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 41.530 7.30e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi207g00097 - - gmx:100527052 271.937