Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi207g00063 ATGGCTCCTCCTAATGGTGAAAGTGAAAGCAAACTTGGCCATGTCGAAGAAGAAGATGGCATGACTTTTGCATTGAACATGGTGACCTCTGTGGTGTTTCCATTGGCTGTTCGATCGGCAGTTGAGTTAGGCATCTTTGACATCTTAGCCAAAGCAAGTGAAGGTGTCAAAGTCAAACTCTCTGCAGCGGACATTGCGCTTCAGATTGGCTCACAATCACCCACAATGATTGACCGTCTTCTAAGGTTGCTGGCTACTCATTCCATGCTACATTGCTCCCTTTCTCATCAATCTGATGAAGAAGATCCTCAGAGGCTCTATAGCCTCGCCCCATACTCCAACTACTTTGTCACAGATGCTGATCATCATGTCTCATTGGGACCTTTGTTGGACTTAAATCTCGACAACATCCCATTCCAATCCTGCCGCCACCGGAGCCATTGGTCGTTCGCTGTAGACGGAGCTTATTACCCACCGTACGCCCGCCGAATCACATACACGTTCATCGTTGTCGGAGCGTTTGTTCACCCACCGTGCAACACCCTTTGTATGTACTTACTGCGTCCTGTTCATTGCTACATCGAGTTGCCTCTTATTGTGTTATGTGTTTTGTCCAGTAAGGAGGGTCCAACCCGATCAAACATACCCGACCCGACTCATGGTTCATCGGGTCGGGTCGGGACGGAAACCAAAGGAGCAATCTTGGAAGGAGGTATACCATTCCACAGGGTTCATGGCAAGCATATATATGAGTATACAGGTTCGGATCCTAGGTTCAATGAAGTTTTCAACAAAGCTATGATCAACAGTACCACGATAGCCATAAAGAGGATTCTCGAGGTCTATGAAGGTTTTGAACATATCAATAGATTGGTGGATGTTGCTGGTGGTCTTGGGATCAATCTCAAGTTGATCACTTCCAAATATCCTCATATTCAGGGTGTTAATTTTGACTTGCCTCATGTCATAGAGCATGCCCCTACCTATGCTGGTGTGACGCATGTGGGAGGAGATATGTTTGAGAGTGTTCCTAATGGAGATGCCATTTTTATGAAGTGGATACTTCACAATTGGAATGATGAAGATTGCTTGAAGTTGTTGAAGAATTGTCATAAAGCTATTCCTGATGATGGAAAAGTGATTGTTGTGGACTCAGTTCTTTCTGTTTTGCCTGAAAATACAACTGTCGCAAAGGTTGCTTCCCAAGCTGACCTCATAATGATGACTCAATTCTCTGGAGGAAAAGAGCGAATCCAAAATGAATTCATGAAATTAGCATTGGGATCTGGATTTAGTGGCATTAGATTCGCCTGTCGTGTTTCTGTCTTCTGGGTGATGGAGTTCTTTAAGTAG 1353 0.4472 MAPPNGESESKLGHVEEEDGMTFALNMVTSVVFPLAVRSAVELGIFDILAKASEGVKVKLSAADIALQIGSQSPTMIDRLLRLLATHSMLHCSLSHQSDEEDPQRLYSLAPYSNYFVTDADHHVSLGPLLDLNLDNIPFQSCRHRSHWSFAVDGAYYPPYARRITYTFIVVGAFVHPPCNTLCMYLLRPVHCYIELPLIVLCVLSSKEGPTRSNIPDPTHGSSGRVGTETKGAILEGGIPFHRVHGKHIYEYTGSDPRFNEVFNKAMINSTTIAIKRILEVYEGFEHINRLVDVAGGLGINLKLITSKYPHIQGVNFDLPHVIEHAPTYAGVTHVGGDMFESVPNGDAIFMKWILHNWNDEDCLKLLKNCHKAIPDDGKVIVVDSVLSVLPENTTVAKVASQADLIMMTQFSGGKERIQNEFMKLALGSGFSGIRFACRVSVFWVMEFFK 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi207g00063 450 FunFam Caffeic acid O-methyltransferase 217 450 - -
Sebi207g00063 450 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 450 IPR016461 GO:0008168
Sebi207g00063 450 SUPERFAMILY "Winged helix" DNA-binding domain 16 119 IPR036390 -
Sebi207g00063 450 Gene3D - 30 152 IPR036388 -
Sebi207g00063 450 Gene3D - 245 278 IPR036388 -
Sebi207g00063 450 Pfam Dimerisation domain 36 85 IPR012967 GO:0046983
Sebi207g00063 450 Gene3D Vaccinia Virus protein VP39 260 440 IPR029063 -
Sebi207g00063 450 FunFam Caffeic acid 3-O-methyltransferase 4 116 - -
Sebi207g00063 450 PANTHER O-METHYLTRANSFERASE 27 436 IPR016461 GO:0008168
Sebi207g00063 450 Pfam O-methyltransferase domain 233 432 IPR001077 GO:0008171
Sebi207g00063 450 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 231 447 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi207g00063 Sebi-Chr207 611376 614890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi207g00063 231 450 Monolignol Biosynthesis Gene Families AT5G54160 53.636 1.32e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi207g00063 K13066 - zju:107418646 413.305