Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi207g00057 ATGACCAAGTTTTCTCTCAAAGAAGAGTCCACAAATGAGTTGGAGGAGGAACTGAAGCGCGTGACGGCAGAAAACAAGAAATTGGTGGAAATGCTGTCAGTGGTGTGTGAGAACTACAACACTTTGAGAAGCCACTTGATGGAATATATGAGCAAGAATCCTGAAAAGGAGCTCAGTCCAACATCAAAAAAAAGGAAGTCTGAAAGCAGCAATAACAATAGTAATCTGATGGGAATGGGAGTTAACAATGGAAACTCTGAGAGCAGCTCTACTGATGAAGAAGAATCTTGCAAGAAACCAAAGGAAGAAACCATCAAAGCCAAAATTTCAAGAGTCTATGTCAGGACTGAAACATCAGATACAGGCCTTATTGTGAAAGATGGATACCAGTGGAGGAAATATGGGCAAAAAGTGACCAGAGATAACCCTTGTCCAAGAGCATATTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTTAAGAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTGCTGGTTGCTACTTATGAAGGGGAACACAATCACCCCCAACCATCTCAAATGGAGGCAACATCAGGTTCAGGCCGTAGTGTGAGCCTAGGTTCAGTACCTTGTTCAGCATCTCTCAGCTCTTGCTCACCACCAGCAGTTGTTACCTTGGACTTGACAAAATCTAAGTGCAACACAGAACCCAAAAAAGATTCATCTAAAGTAGTACCACAGGTTTTGGTGGAACAGATGGCTACTTCTTTGACCACGGATCCTAATTTCAGAGCAGCACTTGTTGCAGCCATCTCAGGAAGATTGATGCACAAGAATTAA 825 0.4279 MTKFSLKEESTNELEEELKRVTAENKKLVEMLSVVCENYNTLRSHLMEYMSKNPEKELSPTSKKRKSESSNNNSNLMGMGVNNGNSESSSTDEEESCKKPKEETIKAKISRVYVRTETSDTGLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPQPSQMEATSGSGRSVSLGSVPCSASLSSCSPPAVVTLDLTKSKCNTEPKKDSSKVVPQVLVEQMATSLTTDPNFRAALVAAISGRLMHKN 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi207g00057 274 Coils Coil 4 31 - -
Sebi207g00057 274 Gene3D WRKY domain 108 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi207g00057 274 SMART WRKY_cls 125 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi207g00057 274 MobiDBLite consensus disorder prediction 51 102 - -
Sebi207g00057 274 MobiDBLite consensus disorder prediction 65 90 - -
Sebi207g00057 274 FunFam WRKY transcription factor 40 110 187 - -
Sebi207g00057 274 ProSiteProfiles WRKY domain profile. 124 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi207g00057 274 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 9 270 IPR044810 GO:0003700
Sebi207g00057 274 Pfam WRKY DNA -binding domain 126 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi207g00057 274 SUPERFAMILY WRKY DNA-binding domain 123 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi207g00057 Sebi-Chr207 531055 532379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi207g00057 1 274 WRKY Transcription Factor Family AT1G80840 56.446 2.31e-98 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi207g00057 WRKY 2.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi207g00057 - - gmx:100807966 374.785