Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi207g00045 ATGGGAAGAAGAAAGGGGCTGAACAACAAGGCATTGTGTTTTATCTTCCCCTTCCTCAAATGCTCCTTCAGCAACTGGTTCTTCGGGTCTTGGATTTCCGCCTCCACATCTCCTAAAACAAGCACATATGTAAAGGAACATGGTTGGAAAGAATTGAATATGACATCAATTATGAAAATTCGAGTAGAAGGAGGAGGAGAGTTTGAGATGGGGATATACCTCAGCGCCCCGAAAACAGAGAAGGCCTCTGAAGATGGAGAGAACGACAGGCTTCGCTACGGTTTGTCTTCCATGCAGGGCTGGCGTGCTTCCATGGAAGATGCTCATGCAGCTCATCTGTATTTGGACGAGTCTACGTCTTACTTTGGTGTTTATGATGGCCACGGAGGCAAAGCAGTTTCAAAATTTTGTGCGAAGTATCTTCACCAGCAGGTGCTGAAGCACGAAGCTTACTTAGCTGGAGATATAGGCACATCGTTACAGAAATCTTTCCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGATGGAGAGAATTAGCAGTCTTGGGAGATAAAATAGAAAAGTTGTCTGGTATGCTAGAGGGGTTTATATGGTCTCCCAGGAGTAGTGAAGCCAATGACCAAGTTGATGATTGGGCTTTTGAGGAGGGACCTCATTCAGATTTCAGTGGACCAAACTGTGGAAGCACAGCTTGTGTGTCTGTCATCCGAGGAAACAAACTTGTTGTCGCAAATGCTGGTGATTCTAGATGTGTTTTATCAAGGAAGGGGCAGGCACATAATTTGTCTAAAGATCACAAGCCTGACCTGGAGGCTGAAAAAGACAGGATTCTAAAAGCTGGTGGTTTTATCCAAGTTGGACGGGTCAATGGAAGTTTGAACTTGGCTAGAGCAATTGGAGATATGGAATTCAAGCAAAACAAATATTTGCCTGCTGAAAAGCAGATTGTGACTGCTGATCCGGACATAACTACAGTTGAGCTTTGTGATGATGATGAGTTTCTTGTAATAGCTTGTGATGGGATATGGGATTGCATGTCTAGCCAGCAGCTTGTGGACTTTATACACGCACAGTTAAAAACAGAGAATAAACTTTCTGTAGTTTGTGAGAAGGTATTTGATAGGTGCTTGGCACCAACAGCTGGTGGTGAGGGATGTGATAACATGACCATGATCTTGATTCAGTTTAAAAATCCTTGGAATCCAGATGCTTCTGTCACAAACCAGCCTCAGCCGTCTGCTCAATCGTCTGAAGCTGATAGAAATTCAGAGAAAATAGAATTAAAGTGA 1293 0.4362 MGRRKGLNNKALCFIFPFLKCSFSNWFFGSWISASTSPKTSTYVKEHGWKELNMTSIMKIRVEGGGEFEMGIYLSAPKTEKASEDGENDRLRYGLSSMQGWRASMEDAHAAHLYLDESTSYFGVYDGHGGKAVSKFCAKYLHQQVLKHEAYLAGDIGTSLQKSFLRMDEMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPRSSEANDQVDDWAFEEGPHSDFSGPNCGSTACVSVIRGNKLVVANAGDSRCVLSRKGQAHNLSKDHKPDLEAEKDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQIVTADPDITTVELCDDDEFLVIACDGIWDCMSSQQLVDFIHAQLKTENKLSVVCEKVFDRCLAPTAGGEGCDNMTMILIQFKNPWNPDASVTNQPQPSAQSSEADRNSEKIELK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi207g00045 430 ProSitePatterns PPM-type phosphatase domain signature. 121 129 IPR000222 GO:0043169
Sebi207g00045 430 Gene3D - 69 398 IPR036457 -
Sebi207g00045 430 CDD PP2Cc 92 397 IPR001932 -
Sebi207g00045 430 SUPERFAMILY PP2C-like 72 400 IPR036457 -
Sebi207g00045 430 MobiDBLite consensus disorder prediction 404 430 - -
Sebi207g00045 430 ProSiteProfiles PPM-type phosphatase domain profile. 92 397 IPR001932 -
Sebi207g00045 430 Pfam Protein phosphatase 2C 222 382 IPR001932 -
Sebi207g00045 430 Pfam Protein phosphatase 2C 92 172 IPR001932 -
Sebi207g00045 430 MobiDBLite consensus disorder prediction 404 420 - -
Sebi207g00045 430 SMART PP2C_4 82 395 IPR001932 -
Sebi207g00045 430 PANTHER PROTEIN PHOSPHATASE 2C 80 396 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi207g00045 Sebi-Chr207 421652 429084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi207g00045 70 403 PP2C-type Phosphatase Gene Family AT2G25070 76.716 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi207g00045 K17499 - gmx:100776787 680.248