Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi207g00043 ATGGCTTCCAAGGCTATTGGCATTGACCTTGGCACCACCTACAGTTGCGTGGGTGTCTGGCAAAACGATCGCGTTGAGATCATAGCAAATGATCAAGGCAACAGAACCACTCCTTCCTACGTTGCTTTCACTGACACAGAGCGTCTCATAGGAGACGCTGCCAAGAACCAGGTCGCCATGAACCCACACAACACTGTCTTCGACGCCAAACGTCTCATTGGTCGCAGATTCTCTGACCCTTCTGTCCAGAGCGACATGAAGCACTGGCCTTTCAAGGTCGTTCCTGGTTCTGCCGACAAACCCATGATCGTCGTTCACTACAAAGGTGAAGAGAAACACTTCTCAGCTGAAGAGATTTCTTCCATGGTCCTCACCAAGATGAAGGAGATTGCTGAGGCTTACCTTGGTCACACCATCAACAACGCTGTGGTCACTGTCCCTGCTTATTTCAACGATTCTCAGAGGCAAGCTACGAAGGATGCTGGTGCCATTGCAGGGCTCAATGTGATGAGAATCATCAATGAGCCAACTGCTGCTGCCATTGCTTATGGTTTGGATAAGAAGGCTTCAAGGTCTGGTGAGAAGAATGTGCTTATCTTTGACCTTGGTGGAGGAACCTTTGATGTTTCTCTTCTCACTATTGAGGAAGGTATTTTTGAAGTGAAGGCCACTGCTGGAGACACTCATTTGGGAGGTGAAGATTTTGACAACAGGCTTGTCAATCACTTTGTGGCTGAGTTCAAAAGAAAGCACAAGAAGGATATCAGCACCAATGCTAGAGCTCTTAGGAGGTTGAGGACTGCATGTGAGAGGGCAAAGAGGACTCTCTCTTCCACCACACAGACAACCATTGAGATTGACTCTCTCTATGAAGGTATTGATTTCTATTCTACCATTACTAGAGCCAGATTTGAGGAATTGAACATGGATTTGTTCAGAAGGTGCATGGAGCCTGTGGAGAAATGTCTGAGGGACTCAAAGATTGATAAGAGTCAAGTCCATGATGTTGTCCTTGTTGGTGGATCAACCAGAATCCCAAAAGTGCAGCAGCTATTGCAGGATTTCTTCAATGGCAAAGAGCTATGCAAGAGTATTAACCCTGATGAGGCTGTGGCTTATGGAGCTGCAGTGCAAGCTGCTATCTTGAGTGGTGAAGGGAATGACAAGGTTCAAGACTTGCTTCTGCTTGATGTCACTCCTCTTAGCCTTGGTATTGAAACTGCAGGTGGTGTGATGACAGTGTTGATTCCAAGGAACACAACCATTCCCACTAAGAAAGAGCAGATTTTTTCCACTTATTCTGATAATCAACCTGGAGTGCTAATTCAGGTCTATGAAGGTGAGAGGGCTAGAACCAAAGACAACAACCTTCTGGGGAAATTTGAGCTCACTGGCATCCCACCGGCACCAAGAGGAGTTCCCCAGATCAATGTCTGCTTTGACATTGATGCAAATGGTATTTTGAATGTTTCAGCAGAGGATAAAACTGCAGGGGTGAAGAACAAGATCACAATCACCAATGACAAAGGAAGATTGAGCAAAGAGGAGATTGAGAGAATGGTGCAGGAGGCAGAGAAATACAAGGCAGAGGATGAGGAGGTGAAGAAGAAGGTGGATGCTAAGAACTCTCTTGAGAACTATGCCTACAACATGAGGAATACAGTCAAAGATGAGAAAATTGGGGGAAAATTGAACCCTGCTGATAAGCAAAAGATAGAGAAGGCAGTTGATGAGACCATTGAGTGGCTTGACAGGAACCAACTAGCAGAGGTGGAGGAATTTGAGGACAAATTGAAAGAGTTGGAGGGATTGTGCAACCCAATTATTGCCAACATGTACCAAGGTGCTGGTGGTGGAGATGTGCCAATGGGAGGTGCAAATGACATTCCTAGTGGTGGCTATGGAAAATCATCCACTGGTGGCGCTGGTGCAGGACCTAAGATTGAAGAAGTTGACTAA 1959 0.4604 MASKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRRFSDPSVQSDMKHWPFKVVPGSADKPMIVVHYKGEEKHFSAEEISSMVLTKMKEIAEAYLGHTINNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDISTNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRRCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNDKVQDLLLLDVTPLSLGIETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIERMVQEAEKYKAEDEEVKKKVDAKNSLENYAYNMRNTVKDEKIGGKLNPADKQKIEKAVDETIEWLDRNQLAEVEEFEDKLKELEGLCNPIIANMYQGAGGGDVPMGGANDIPSGGYGKSSTGGAGAGPKIEEVD 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi207g00043 652 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 389 545 IPR029047 -
Sebi207g00043 652 Gene3D - 67 122 - -
Sebi207g00043 652 Pfam Hsp70 protein 5 614 IPR013126 GO:0005524|GO:0140662
Sebi207g00043 652 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 539 620 IPR029048 -
Sebi207g00043 652 ProSitePatterns Heat shock hsp70 proteins family signature 1. 8 15 IPR018181 -
Sebi207g00043 652 SUPERFAMILY Actin-like ATPase domain 193 384 IPR043129 -
Sebi207g00043 652 SUPERFAMILY Actin-like ATPase domain 3 187 IPR043129 -
Sebi207g00043 652 Gene3D Actin; Chain A, domain 4 231 314 - -
Sebi207g00043 652 Gene3D - 542 615 IPR029048 -
Sebi207g00043 652 Gene3D - 6 380 - -
Sebi207g00043 652 FunFam Heat shock 70 kDa protein 194 257 - -
Sebi207g00043 652 FunFam heat shock cognate 70 kDa protein-like 541 615 - -
Sebi207g00043 652 CDD HSPA1-2_6-8-like_NBD 5 383 - -
Sebi207g00043 652 Coils Coil 584 604 - -
Sebi207g00043 652 MobiDBLite consensus disorder prediction 616 652 - -
Sebi207g00043 652 PANTHER HEAT SHOCK PROTEIN 70KDA 5 579 IPR013126 GO:0005524|GO:0140662
Sebi207g00043 652 FunFam Heat shock protein 70 6 193 - -
Sebi207g00043 652 FunFam Heat shock cognate 70 kDa protein 2 315 362 - -
Sebi207g00043 652 ProSitePatterns Heat shock hsp70 proteins family signature 2. 199 212 IPR018181 -
Sebi207g00043 652 Gene3D - 188 362 - -
Sebi207g00043 652 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 541 IPR029047 -
Sebi207g00043 652 Coils Coil 514 537 - -
Sebi207g00043 652 FunFam Heat shock cognate 71 kDa protein 231 314 - -
Sebi207g00043 652 FunFam Heat shock 70 kDa protein 67 122 - -
Sebi207g00043 652 PRINTS 70kDa heat shock protein signature 142 162 - -
Sebi207g00043 652 PRINTS 70kDa heat shock protein signature 4 17 - -
Sebi207g00043 652 PRINTS 70kDa heat shock protein signature 365 385 - -
Sebi207g00043 652 PRINTS 70kDa heat shock protein signature 473 489 - -
Sebi207g00043 652 PRINTS 70kDa heat shock protein signature 54 62 - -
Sebi207g00043 652 PRINTS 70kDa heat shock protein signature 392 411 - -
Sebi207g00043 652 PRINTS 70kDa heat shock protein signature 205 215 - -
Sebi207g00043 652 PRINTS 70kDa heat shock protein signature 32 44 - -
Sebi207g00043 652 PRINTS 70kDa heat shock protein signature 333 349 - -
Sebi207g00043 652 ProSitePatterns Heat shock hsp70 proteins family signature 3. 336 350 IPR018181 -
Sebi207g00043 652 FunFam Heat shock 70 kDa 387 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi207g00043 Sebi-Chr207 396759 398717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi207g00043 2 652 Calmodulin-binding Proteins AT1G16030 84.356 0.0 1147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi207g00043 K03283 - pvy:116132160 1159.44