Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi207g00038 ATGGAAAAGTACGAGAAGTTGGAGAAGGTTGGAGAAGGCACTTACGGAAAAGTGTACAAGGCGAAGGAGAAAGCCACTGGCAAAATTGTTGCCCTCAAAAAGACCCGTCTCGAGATGGATGAGGAAGGTGTCCCTCCCACTGCCCTTCGAGAGGTCTCTCTCCTTCAGATGCTCTCTCAATCCATTTACATCGTCCGTCTCCTCAACGTCGAGCACGTCGACAAGGCCCCTAAGTCCTCTAAGTCTGCCTCCGCTGCCCTTCAAACCAAGCCCCTCCTCTATCTCGTCTTCGAGTATCTCGACACCGATCTCAAAAAATTCATCGATACTCACCGCAAGGGCCCAAACCCTAAACCCCTTTCCCCTACCCTCATTCAGAGCTTCCTCTTCCAGCTTTTGAAGGGCGTCTCTCACTGCCACAGCCACGGTGTCCTCCACCGCGATCTCAAGCCACAGAACCTCCTTCTCGATCAGCAAAAAGGCATTCTCAAGATCGCCGACCTTGGCCTTGGACGCGCCTTCACTGTTCCTCTCAAGAGCTACACTCATGAGATCGTCACCCTCTGGTACAGAGCTCCTGAGGTTCTCCTCGGTTCCACACACTACTCCACCGGCGTTGACATGTGGTCCGTTGGATGCATCTTTGCTGAAATGGCGAGAAGGCAGGCTCTGTTTCCAGGGGATTCTGAATTCCAGCAGCTCCTTAACATATTCAAGATTATGGGGACTCCAACGGAGGAGCAATGGCCTGGAGTTACTTCTCTGCGTGATTGGCACGTGTACCCACGGTGGGAGCCTCAGAACTTGGCAAGGACTGTGCCCTCCTTAGGACCTGATGGAGTGGACCTTCTCTCGTTCTCAATTATATCAAATTTAGTAGACGGGGATGGTTTGTGCAATTTGGTAGCATCCTATGAGGAAGTGAGTTTCCGCTTTCCACCGAGAAAGCAAAAATAA 957 0.5162 MEKYEKLEKVGEGTYGKVYKAKEKATGKIVALKKTRLEMDEEGVPPTALREVSLLQMLSQSIYIVRLLNVEHVDKAPKSSKSASAALQTKPLLYLVFEYLDTDLKKFIDTHRKGPNPKPLSPTLIQSFLFQLLKGVSHCHSHGVLHRDLKPQNLLLDQQKGILKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTGVDMWSVGCIFAEMARRQALFPGDSEFQQLLNIFKIMGTPTEEQWPGVTSLRDWHVYPRWEPQNLARTVPSLGPDGVDLLSFSIISNLVDGDGLCNLVASYEEVSFRFPPRKQK 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi207g00038 318 Gene3D Transferase(Phosphotransferase) domain 1 103 289 - -
Sebi207g00038 318 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Sebi207g00038 318 Gene3D Phosphorylase Kinase; domain 1 1 101 - -
Sebi207g00038 318 SUPERFAMILY Protein kinase-like (PK-like) 1 286 IPR011009 -
Sebi207g00038 318 ProSiteProfiles Protein kinase domain profile. 4 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi207g00038 318 SMART serkin_6 4 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi207g00038 318 FunFam Cyclin-dependent kinase 2 103 292 - -
Sebi207g00038 318 Pfam Protein kinase domain 4 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi207g00038 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Sebi207g00038 318 PANTHER CELL DIVISION PROTEIN KINASE 1 285 - -
Sebi207g00038 318 FunFam Cyclin-dependent kinase B2,2 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi207g00038 Sebi-Chr207 355182 357299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi207g00038 1 285 Core Cell Cycle Gene Families AT3G54180 81.404 3.62e-174 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Sebi207g00038 Pkinase 1.1e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi207g00038 K07760 - gmx:100805119 517.694