Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi206g00034 ATGTGTAGTAGAGGCCATTGGAGGCCATCTGAGGATGAGAAGCTTCGGGAGTTGGTGGAACGCTATGGACCTCATAATTGGAACGCCATAGCTGAGAAGCTTAGAGGAAGATCAGGGAAAAGTTGCAGGTTGAGATGGTTCAATCAATTGGACCCAAGAATAAATAGAAATCCTTTCACAGAAGAAGAGGAAGAGCGTCTTCTAGCTTCTCACAGGATTCATGGTAATAGATGGGCTGTGATTGCAAGACACTTCCCTGGAAGGACTGATAACGCTGTCAAGAATCATTGGCATGTGATGATGGCAAGGATTCGCCGAGAAAGCTACCCTTGTGTCACATATAGCCCTTTCCAATTCCCCAAGAAGTTTCATTTTCAAGATCCAAGTTCTTGTTCCACAATGTTTCAAGAGAGGAGTACTCAATCAGTTGAGTTTTATGATTTTCTTCAAGTAAATACTGATTCCAATAAAAGTGAAGTGACAGACAATGCAAAAAGAGATGATGAGGAAGTTAATCAAGATGCTGTGGGACAGCGGAGGAACAAGGATAACGGCGTTCCATTCATTGATTTTTTGTCTACTGGAAGCTGCTAA 594 0.4242 MCSRGHWRPSEDEKLRELVERYGPHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLLASHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRESYPCVTYSPFQFPKKFHFQDPSSCSTMFQERSTQSVEFYDFLQVNTDSNKSEVTDNAKRDDEEVNQDAVGQRRNKDNGVPFIDFLSTGSC 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi206g00034 197 FunFam MYB transcription factor 4 55 - -
Sebi206g00034 197 Gene3D - 57 118 - -
Sebi206g00034 197 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Sebi206g00034 197 Pfam Myb-like DNA-binding domain 7 67 - -
Sebi206g00034 197 Gene3D - 4 55 - -
Sebi206g00034 197 PANTHER MYB PROTEIN-RELATED 4 158 - -
Sebi206g00034 197 SMART sant 55 103 IPR001005 -
Sebi206g00034 197 SMART sant 3 52 IPR001005 -
Sebi206g00034 197 MobiDBLite consensus disorder prediction 156 182 - -
Sebi206g00034 197 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 105 IPR017930 -
Sebi206g00034 197 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Sebi206g00034 197 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 54 IPR017930 -
Sebi206g00034 197 MobiDBLite consensus disorder prediction 159 177 - -
Sebi206g00034 197 CDD SANT 7 48 IPR001005 -
Sebi206g00034 197 CDD SANT 58 101 IPR001005 -
Sebi206g00034 197 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi206g00034 Sebi-Chr206 1065752 1068022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi206g00034 1 196 MYB Transcription Factor Family AT1G17950 55.328 7.27e-83 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi206g00034 Myb_DNA-bind_6 2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi206g00034 K09422 - gmx:100785170 346.28