Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi206g00029 ATGGTGCTTTCATCCACATGTGAAGACCCATGTGAGCAACTGCAGTCCACTTTTGCTTCAAGATATGTGCTTGACCCACTACCCAAGTATAAGTTACCAGAGAAATCAATTCCAAAGGATGCAGCATATCAGATAATAAACAGTGAGTTGATGCTGGATGGGACACCAAGGCTTAACTTGGCTTCATTTGTGACCACATGGATGGAACCAGAGTGTGACAAGCTCATAGTAGATTCCCTTAACAAGAATTATGTTGACATGGATGAGTATCCTGTCACCACTGATCTCCAGAACCGGTGCGTGAATATTATAGCACACCTTTTCAATGCTCCTATTGGAGCAGAAGAAACTGCTATGGGAGTGGGAACTGTGGGGTCATCAGAGGCCATAATGTTGGCTGGTCTTGCTTTCAAAAGGAAATGGCAGCTAAAGAGAAAATCACAAGGCAAACCATATGACAAGCCCAACATAGTTACAGGGGCTAATGTGCAGGTTTGTTGGGAAAAATTTGCTAACTACTTTGAAGTTGAGCTCAAGGAGGTGAAACTCACAGAGAAATGCTTTGTGATGGACCCAGTGAAAGCAGTGGAATTGGTGGATGAGAACACAATATGTGTTGCAGCCATTTTGGGGTCAACTATGACAGGAGAGTTTGAGGATGTCAAGCTTCTCAATGAACTTCTTACAAAGAAGAACAAGGAGACAGGGTGGGATACCCCAATTCATGTTGATGCTGCAAGTGGAGGGTTTATTGCTCCATTTATCTACCCTGATCTTGAGTGGGATTTCCGTTTGCCATTAGTGAAGAGTATCAATGTCAGTGGTCACAAGTATGGCCTTGTATACCCTGGTGTTGGTTGGGTTGTCTGGAGGAACAAAGATGAGTTGCCAGATGAACTTATCTTTCACATCAACTATCTTGGATCAGATCAACCCACTTTCACTCTCAATTTCTCCAAAGGCTCTAGTCAAATCATTGCTCAATATTATCAGTTCTTGAGGCTTGGCTTTGAGGCATGA 1020 0.4314 MVLSSTCEDPCEQLQSTFASRYVLDPLPKYKLPEKSIPKDAAYQIINSELMLDGTPRLNLASFVTTWMEPECDKLIVDSLNKNYVDMDEYPVTTDLQNRCVNIIAHLFNAPIGAEETAMGVGTVGSSEAIMLAGLAFKRKWQLKRKSQGKPYDKPNIVTGANVQVCWEKFANYFEVELKEVKLTEKCFVMDPVKAVELVDENTICVAAILGSTMTGEFEDVKLLNELLTKKNKETGWDTPIHVDAASGGFIAPFIYPDLEWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRNKDELPDELIFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFLRLGFEA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi206g00029 339 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 338 IPR002129 GO:0016830|GO:0019752|GO:0030170
Sebi206g00029 339 SUPERFAMILY PLP-dependent transferases 12 338 IPR015424 -
Sebi206g00029 339 Gene3D - 1 65 - -
Sebi206g00029 339 FunFam Glutamate decarboxylase 66 339 - -
Sebi206g00029 339 NCBIfam glutamate decarboxylase 16 338 IPR010107 GO:0004351|GO:0006536|GO:0030170
Sebi206g00029 339 PANTHER GLUTAMATE DECARBOXYLASE 1 338 IPR010107 GO:0004351|GO:0006536|GO:0030170
Sebi206g00029 339 FunFam Glutamate decarboxylase 5 65 - -
Sebi206g00029 339 Gene3D - 66 339 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi206g00029 Sebi-Chr206 971728 975643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi206g00029 1 339 Calmodulin-binding Proteins AT2G02010 82.006 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi206g00029 K01580 - gmx:100796475 605.52