Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi206g00024 ATGGCTGAGTTTCAGAAAGATGAGGTGCCAATGCTATCAGATACTCATCCCAAACTATCAAATGAACCTGCTGATTCAAAATTCCAGAGACTTGTACCTAGGACACGAAGTGTATCAATTTCTATTCCCATGATCCCTCTGGAGCCATATGATATAAATACTAATCTTGTGGGACACACTGGTCCCCTAAAGAGTCAAAGAAAAACTCCATTTAATCAAATGAGCGGTCCATTATATATTACCCATAGACCTGGAAACCTTTTCTGGCAGAATATGGTAGCACCAGGGAACAAAGCAGTGGAAAGTAAGACAGAAAATTTTCCTTCATCCTGTGCCATGAGTGAAAATGATTTGCAGAACAACTATGCTGGTAAAAATGAACATTTAGTAAGGTCTGGTCAACTGGGAATGTGTAATGATCCATATTGTACAACTTGCCCAACTTACTTCAAGGCGACTCAACAAAGGGATTCAAAAGCTTCGGGTATATTCAATCCTAAGTTTCACAGTTCCCTTTATGGGGATGCCAAGGGTTGGGCAAGAAGACTTTTTGCTTTCTTGATTCCACATGTTCCTAGAGTTATGAATCCTCATACTAAACTTGTACAACAATGGAACAAATTTTTTGCAATTTGTTGCTTGGTGGCAATTTTTGTGGATCCATTATTTTTCTTCTTGCTCTCTGTGCAGAAGGAAGATAAATGTATTGTTATAAACTCAACTTTGACAACAGTGCTTGTTTTACTTAGAAGCATGAATGATTTCATATACTTCCTAAACATTATTCTTCAGTTTAGGCTGGCTTATGTGGCTCCTGAGTCTAGGGTGGTTGGTGCAGGGGAGTTAGTTGACCATCCTAAAAAAATAGCTCTTCACTATCTTCAGACATATTTTGCTTTTGACTTGTTTGTTGTACTTCCACTTCCTCAGATAACCATATTGTTTGTCCTACCAAAACACTTGGGATCATCAGGAGCAAACTATGCAAAGAATATTTTGCGTGCTGTGCTCCTTGTTCAGTATATTCCAAGATTGTGTAGATTTATCCCTATGCTAATATCTCCAACCGGATTCATATTTGAGTCAGCATGGGAAAGTTTCTTTATAAATCTTTTTATCTTTATGCTATCAGGCCATGTTGTTGGGTCATGGTGGTACCTCTTCGGTTTGCAGAGGGTTAATCAATGTCTACGAAATGCATGCAAGACATCACATATTGTTGGATGCTCAAAATTCATTGATTGTGGTCATGGAAATACCAGAGAATATCAAATTGATGCAAATTGGAACCAATGGAAGAACAATGCTAATGCAAGTGCTTGTTTTACTGAAGATGGTTTCGATTATGGGATCTATCTTAAAGCTGTCAACCTTACTGCAGATCATAATGTGGTCACTAGATATGTATATTCATCATTTTGGGGATTCCAGCAAATTAGTACTCTGGCTGGCAATTTAACTCCAAGCTATTTTGTTTGGGAAGTCCTTTTCACCATGGCCATCATAGGAATGGGACTCTTGCTTTTTGCTCTTCTCATTGGGAACATACAGAACTTTCTTCAAGCTCTTGGGCGCAGGAGGCTAGAAATGTCACTTAGACAACGTGATGTTGAGCAATGGATGAGCCATAGGCGCCTAGCTGATGATCTGAGAAGGAGAGTGCGACAGGCTGAACGTTATAACTGGGCTGCAACAAGAGGGGTCAATGAAGAAATTCTCATGGAGAATTTGCCAGAAGATCTCCAGAGGGACATCAGACGTCATCTCTTTAAATTTGTTAAGAAAGTTCGAATTTTTGCCTTGATGGATGAGCCTATATTGGACGCCATCTGTGAGAGACTAAGACAAAAAATATACATCAAAGGAAGTGAAATTTTGTATGATGGTGGTCTGGTAGAGAAGATGGTCTTTGTTGTGCGTGGAAAATTGGAGAGCATTGGTGAAGATGGAATTAGAGTTCCTCTATCTGAAGGGAGTGTTTGTGGTGAAGAACTTCTGACATGGTGTCTTGAGCATCCCTCAGATGGTGGAAAAGCAAGGATTCCAAGACAAAGGTTGGTTAGCAATAGGACAGTGTTGTGCTTAACGAATGTGGAGGCATTTTCCCTAAGAGCAGCAGATCTTGAAGAAGTTACAAGCCTTTTTGCAAGATTCTTGAGGAGTCCTTGTGTTCAAGGAGCCATAAGGTATGAATCACCTTACTGGAGATGCCTTGCAGCAATGCGTATACAGGTTGCATGGAGATACAGAAAGAAACGTCTTAGTCGTGCTGACACTTTACAATCAAATGATCAATGA 2298 0.3982 MAEFQKDEVPMLSDTHPKLSNEPADSKFQRLVPRTRSVSISIPMIPLEPYDINTNLVGHTGPLKSQRKTPFNQMSGPLYITHRPGNLFWQNMVAPGNKAVESKTENFPSSCAMSENDLQNNYAGKNEHLVRSGQLGMCNDPYCTTCPTYFKATQQRDSKASGIFNPKFHSSLYGDAKGWARRLFAFLIPHVPRVMNPHTKLVQQWNKFFAICCLVAIFVDPLFFFLLSVQKEDKCIVINSTLTTVLVLLRSMNDFIYFLNIILQFRLAYVAPESRVVGAGELVDHPKKIALHYLQTYFAFDLFVVLPLPQITILFVLPKHLGSSGANYAKNILRAVLLVQYIPRLCRFIPMLISPTGFIFESAWESFFINLFIFMLSGHVVGSWWYLFGLQRVNQCLRNACKTSHIVGCSKFIDCGHGNTREYQIDANWNQWKNNANASACFTEDGFDYGIYLKAVNLTADHNVVTRYVYSSFWGFQQISTLAGNLTPSYFVWEVLFTMAIIGMGLLLFALLIGNIQNFLQALGRRRLEMSLRQRDVEQWMSHRRLADDLRRRVRQAERYNWAATRGVNEEILMENLPEDLQRDIRRHLFKFVKKVRIFALMDEPILDAICERLRQKIYIKGSEILYDGGLVEKMVFVVRGKLESIGEDGIRVPLSEGSVCGEELLTWCLEHPSDGGKARIPRQRLVSNRTVLCLTNVEAFSLRAADLEEVTSLFARFLRSPCVQGAIRYESPYWRCLAAMRIQVAWRYRKKRLSRADTLQSNDQ 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi206g00024 765 ProSiteProfiles cAMP/cGMP binding motif profile. 598 673 IPR000595 -
Sebi206g00024 765 Pfam Ion transport protein 205 526 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sebi206g00024 765 CDD CAP_ED 598 711 IPR000595 -
Sebi206g00024 765 Gene3D Jelly Rolls 596 717 IPR014710 -
Sebi206g00024 765 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 138 756 - -
Sebi206g00024 765 Gene3D Helix hairpin bin 526 590 - -
Sebi206g00024 765 MobiDBLite consensus disorder prediction 1 23 - -
Sebi206g00024 765 Gene3D - 183 523 - -
Sebi206g00024 765 SMART cnmp_10 598 730 IPR000595 -
Sebi206g00024 765 SUPERFAMILY Voltage-gated potassium channels 197 526 - -
Sebi206g00024 765 SUPERFAMILY cAMP-binding domain-like 526 719 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi206g00024 Sebi-Chr206 824715 835242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi206g00024 5 674 Ion Channels AT3G17700 61.630 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi206g00024 K05391 - gmx:100795955 1256.12