Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi206g00023 ATGGCTAATTTTGAAAATGATGAGATGCCGATGCTGTCAAAAACAGATGCTCAACCATATGATGAACCTTTTGATTCTAAATTTCAAAGGCTTGTAACCAGGACACAAAGTGCATCAACAATTTCTGTTCCTATGAGTTCCTTGGAGTCATATGAGAGAGAAACTAGTCTTGCAGGACATACTGGTCCACTTCTGAGTAAGAGAAAAACACCCTTAATTCAGATGAGTGGTCCACTAAATGGTACCCTGGGAACTGGAAATCCTTTGCAGCAGCGTATTATTGGAACAGAAAACAAAGCAGAGGAGAGAAAGACAGAAAATTTTGCTGCTTTCTGCAGCACAGGTTCAAATTACTGGAATAATGACCATGACAGAAAAAATGAACACTTACTGAGGTCTGGGCAACTGGGAATGTGTAATGATCCTTATTGTACTACTTGCCCTATTTACTTCAATGTTCCTCAGCAAAGAAATCCAAAACCATCAACTATATTTGATCCCAAGGATTATAAATGTATCGTAATCAACTGGACTATGACAACAGCACTTGTTTTAATTAGAAGCATAAACGATCTTGTATATTTCTTTAACATTCTTCTCCAGTTTAGGTTGGCTTATGTTTCTCCAGAGTCTACAGTGGTTGGTGCTGGAGATTTAGTTGACCATCCAAAGAAAATTGCTCTTCATTACCTGAGGCATTATTTCCTTATTGACTTATTTGTTGTATTTCCTTTTCCTCAGATAATGATATTGTATGTCCTGCCACATTCCTTTGGAGGAGCAAATGATGCTAAGAATCTTCTGCGTGCAGCAATCTTAATGCAGTATATTCCCAAGTTATTCAGGTTTCTGCCGCTGCTAATTGGCCAATCTCCGACCGGATTCATATTTGAGTCAGCTGGGGCAAATTTCATTATAAATCTTCTCATTTTTATGCTTGCTAGCCATGTTGTTGGTTCTTGCTGGTACCTCTTTGGCCTACAGAGGGTTAATCAATGCTTGCGAGATGCCTGCCACAAGTCTAATATTACTGGATGCATGAAATTTATTGATTGTGGACATGACCTTAATGGAAACAATCAGCCTGACCTAAGATCAAGTCAATGGAACAACAATATAGATGCCATGAATTGTTTGAATCCCCCTTCTGAAGGTGGTTTTCCTTATGGGATCTATGATGCTGCTGTACCACTTACTACAGAAACAAACATGGCCAACAAATATGTGTATTCTCTTTTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGTAATCAAACCCCAAGCTATTTTGTGTGGGAAGTCCTTTTTACAATGGCCATCATAGGATTGGGACTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGGACGGAGGAGGCTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCAGAAGATCTCAGAAGGAAAGTACAGCAGGCTGAACGATATAATTGGGCTGCAACAAGGGGGGTTGATGAAGAAACGCTTCTGGAGAAGTTGCCAGAAGATCTCCGGACAGAGATAAGACGCCATCTCTTCAAATTTGTCAAAAAGGTTCGGATTTTTGCCCTGATGGATGAGCCTATTTTAGATGCCATTCGAGAGAGACTAAAACAAAAGACATACATCAAAGGAAGTAAAGTTTTGAGTCAAGGTGGTCTCGTAGAGAAGATGGTCTTTGTTGTGCGTGGAAAAATGGAAAGCATTGGAGAAGATGGAACTTCAGTTCCCTTATCTGAAGGGGATGCTTGTGGTGAAGAACTTCTGACATGGTATCTTGAACATTCTTCTGTAATCACAGATGGTAAAAAAGTAAGGCTTCAGGGACAAAGATTACTTAGCAACAGGACAGTAAAGTGCTTAACAAATGTGGAAGCTTTTTCACTCCGAGCTGCAGATCTTGAAGAAGTCACAACCCTTTTCATGAGATCCTTGAGGAGTCTACGTGTTCAAGGACCCCTAAGGTATGAATCGCCATATTGGAGATCCCTTGCAGCAACCCGCATTCAAGTTGCATGGAGATACAGGAAGAAACGTCAAAATCGTGTTGATTCTTTATTATCAGATCAAACAATGAAGTTGTAG 2136 0.4045 MANFENDEMPMLSKTDAQPYDEPFDSKFQRLVTRTQSASTISVPMSSLESYERETSLAGHTGPLLSKRKTPLIQMSGPLNGTLGTGNPLQQRIIGTENKAEERKTENFAAFCSTGSNYWNNDHDRKNEHLLRSGQLGMCNDPYCTTCPIYFNVPQQRNPKPSTIFDPKDYKCIVINWTMTTALVLIRSINDLVYFFNILLQFRLAYVSPESTVVGAGDLVDHPKKIALHYLRHYFLIDLFVVFPFPQIMILYVLPHSFGGANDAKNLLRAAILMQYIPKLFRFLPLLIGQSPTGFIFESAGANFIINLLIFMLASHVVGSCWYLFGLQRVNQCLRDACHKSNITGCMKFIDCGHDLNGNNQPDLRSSQWNNNIDAMNCLNPPSEGGFPYGIYDAAVPLTTETNMANKYVYSLFWGFQQISTLAGNQTPSYFVWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLRRKVQQAERYNWAATRGVDEETLLEKLPEDLRTEIRRHLFKFVKKVRIFALMDEPILDAIRERLKQKTYIKGSKVLSQGGLVEKMVFVVRGKMESIGEDGTSVPLSEGDACGEELLTWYLEHSSVITDGKKVRLQGQRLLSNRTVKCLTNVEAFSLRAADLEEVTTLFMRSLRSLRVQGPLRYESPYWRSLAATRIQVAWRYRKKRQNRVDSLLSDQTMKL 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi206g00023 711 CDD CAP_ED 538 654 IPR000595 -
Sebi206g00023 711 MobiDBLite consensus disorder prediction 1 21 - -
Sebi206g00023 711 SUPERFAMILY cAMP-binding domain-like 466 655 IPR018490 -
Sebi206g00023 711 Pfam Ion transport protein 179 466 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sebi206g00023 711 Gene3D Jelly Rolls 536 660 IPR014710 -
Sebi206g00023 711 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 164 699 - -
Sebi206g00023 711 Gene3D - 170 463 - -
Sebi206g00023 711 ProSiteProfiles cAMP/cGMP binding motif profile. 538 606 IPR000595 -
Sebi206g00023 711 SUPERFAMILY Voltage-gated potassium channels 174 465 - -
Sebi206g00023 711 Gene3D Helix hairpin bin 465 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi206g00023 Sebi-Chr206 661861 814387 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi206g00023 5 615 Ion Channels AT3G17700 51.906 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi206g00023 K05391 - gmx:100795427 1099.73