Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi204g00093 ATGGGTTTGGGAGTATTTGGTTCTGTTTTAGTTCTGACACTCTTCTTCAAGCATTTAGCATGCCAACAACCAAATACTGATGATTTCTTTGTGTCTGATTTCTTCAAGAAGATGGGTTTAGCATCTTCTAAGGCTTACAACTTCTCTTCTTCTGTTTGTTCATGGCAAGGGGTTACCTGTGATGCCAAGAGAGAACATGTTGTTGGGTTAGTTGTTTCTGGTATGGGCCTCTCTGGTCCTATTCCAGATACCACCATTGGCAAGCTTAGCAAGATTCAATCTTTGGACCTCAGCAACAACAAAATCACTGACTTGCCTTCAGATTTCTGGAGTTTAAGCTTTCTCAAGAGCCTTAACCTCTCCTCCAATCAGATTTCTGGCTCATTGACTAACAACATTGGAAACTTTGGTTTGCTAGAAGTATTTGACTTATCCAGCAACAATTTCTCTGGGGAAATTCCTGAAGCTATTAGTTCTTCTGTGAGTCTGAAGGTCCTTAAACTTGACCACAACAAGTTTGAACAAAGCATACCTTCTGGGATTCTCAAGTGTCAGTCTCTAGTTTCAATTGATCTTTCATCAAATCAACTAAGCGGGGCACTTCCAGATGGTTTTGGTGCTGCTTTTCCTAAGCTCACAAGCTTGAACCTTGCTGGGAATAATATTTATGGACATGATTCAGATATTTCTGGGTTAAAGTCCATTGTGAGTCTCAACATATCTGGCAATTCATTTCAGGGTTCTGTCATGAGCATGTTTCAAGGAAGGCTGGAAGTTATGGACCTTAGCAGAAACCAATTCCAAGGTCACATTTCTCAGGTACAGTCCATCTCTAATTACAATTGGTCTCATTTAGTTTATCTGGATTTGTCAGAGAATCAGCTTAGTGGGGAAATTTTCCAAAATTGGAATGAATCCCAGAATCTAAAGCACCTTAATCTTGCCCATAATAGATTTACCAGACAGAAATTCCCCAAGATTGAAATGCTCTCAGGATTGGAATATCTAAACTTGTCCAAAACTAGTCTGATTAGTTACATTCCTGCAGAAATTTCACAACTTAGTAATTTGAAAACACTTGATATTTCTATGAATCATCTTATAGGCCAAATCCCCTTTCTAAGGAATAAAAACCTCCAAATTCTTGACCTTTCCAACAACAACTTGAGTGGAGAAGTCCCTCCATCAGTCTTAGAGAAACTCCCATGGATGGAGAAATACAACTTCTCTTGTAATAACTTAACCCTTTGTGCTTTGGAAATCAAACCAGCTATCCTCAAAACAGCATTCTTTGGATTAGTGAACAGTTGTCCAATTGCTGCAAACCCAAGTCTCTTTAAGAAAAGAGCCACTGATCACAAGGGAATGAAGCTAGCTCTGGCATTGACCCTTTCAATGATCTGCTTGCTTGTTGGACTTTTGTTTCTAGCAGTTAGTCGCCTAAGGAAAACAAAATCTTGGCCAGTTAAACAATCTTCATACAAAGAAGAACAAAATATGTCAGGTCCCTTTTCATTCCACACTGATTCAACCACTTGGGTGGCTGATGTTAAGCAACCAACATCTGTCCCAGTAGTAATCTTTGAGAAGCCACTGTTGAATATCACATTTGCAGACCTCTTGGCTGCAACTTCAAATTTTGATAGGGGTACCCTTTTGGCAGAAGGAAAATTTGGGCCTGTTTATAGAGGTTTCCTACCTGGTGGCATTCATGTAGCAGTTAAAGTTCTGGTTGTTGGATCTACTTTGACAGATAAAGAAGCTGCAAGAGAACTTGAGTATCTTGGTAGAATTAAGCACCCCAATCTTGTTCCTCTAACTGGATATTGTGTAGCTGGGGATCAGAGAATTGCCATATATGATTACATGGAGAATGGGAACTTGCAAAACTTGCTTTATGACTTGCCACTTGGGGTACTACAAAGGACAGATGATTGGAGCACAGATACATGGGAAGAAGATGACAATGACTATCCTGATGAGAAAGAAACAACTTTGGTAAGTTGGGTCAGAGGATTGGTGAGAAAGAACAAAGCTTCAAGAGCTATTGATCCAAAAATTCATGACACAGGACCAGAAAAGCAAATGGAGGAGGCCCTTAAGATTGGTTATCTATGCACTGCTGACCTTCCTTCCAAGAGACCAAGCATGCAGCAGATAGTTGGACTTCTTAAAGATATTGAACTTGCTGCTAATTAG 2199 0.3984 MGLGVFGSVLVLTLFFKHLACQQPNTDDFFVSDFFKKMGLASSKAYNFSSSVCSWQGVTCDAKREHVVGLVVSGMGLSGPIPDTTIGKLSKIQSLDLSNNKITDLPSDFWSLSFLKSLNLSSNQISGSLTNNIGNFGLLEVFDLSSNNFSGEIPEAISSSVSLKVLKLDHNKFEQSIPSGILKCQSLVSIDLSSNQLSGALPDGFGAAFPKLTSLNLAGNNIYGHDSDISGLKSIVSLNISGNSFQGSVMSMFQGRLEVMDLSRNQFQGHISQVQSISNYNWSHLVYLDLSENQLSGEIFQNWNESQNLKHLNLAHNRFTRQKFPKIEMLSGLEYLNLSKTSLISYIPAEISQLSNLKTLDISMNHLIGQIPFLRNKNLQILDLSNNNLSGEVPPSVLEKLPWMEKYNFSCNNLTLCALEIKPAILKTAFFGLVNSCPIAANPSLFKKRATDHKGMKLALALTLSMICLLVGLLFLAVSRLRKTKSWPVKQSSYKEEQNMSGPFSFHTDSTTWVADVKQPTSVPVVIFEKPLLNITFADLLAATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDKEAARELEYLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVLQRTDDWSTDTWEEDDNDYPDEKETTLVSWVRGLVRKNKASRAIDPKIHDTGPEKQMEEALKIGYLCTADLPSKRPSMQQIVGLLKDIELAAN 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi204g00093 732 Gene3D Ribonuclease Inhibitor 373 428 IPR032675 -
Sebi204g00093 732 SUPERFAMILY L domain-like 43 419 - -
Sebi204g00093 732 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 161 249 IPR046959 -
Sebi204g00093 732 Gene3D Ribonuclease Inhibitor 30 177 IPR032675 -
Sebi204g00093 732 ProSiteProfiles Protein kinase domain profile. 547 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi204g00093 732 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 106 201 - -
Sebi204g00093 732 ProSiteProfiles Leucine-rich repeat profile. 91 112 IPR001611 GO:0005515
Sebi204g00093 732 Pfam Protein tyrosine and serine/threonine kinase 551 633 IPR001245 GO:0004672|GO:0006468
Sebi204g00093 732 Gene3D Ribonuclease Inhibitor 178 278 IPR032675 -
Sebi204g00093 732 Gene3D Ribonuclease Inhibitor 279 372 IPR032675 -
Sebi204g00093 732 SMART LRR_typ_2 161 184 IPR003591 -
Sebi204g00093 732 SMART LRR_typ_2 209 232 IPR003591 -
Sebi204g00093 732 SMART LRR_typ_2 89 111 IPR003591 -
Sebi204g00093 732 SMART LRR_typ_2 330 354 IPR003591 -
Sebi204g00093 732 SMART LRR_typ_2 377 400 IPR003591 -
Sebi204g00093 732 SMART LRR_typ_2 112 136 IPR003591 -
Sebi204g00093 732 SMART LRR_typ_2 185 207 IPR003591 -
Sebi204g00093 732 ProSiteProfiles Leucine-rich repeat profile. 378 400 IPR001611 GO:0005515
Sebi204g00093 732 Pfam Leucine Rich Repeat 378 397 IPR001611 GO:0005515
Sebi204g00093 732 SMART tyrkin_6 547 724 IPR020635 GO:0004713|GO:0006468
Sebi204g00093 732 FunFam Putative LRR receptor-like serine/threonine-protein kinase 508 622 - -
Sebi204g00093 732 FunFam Calmodulin-binding receptor kinase CaMRLK 255 373 - -
Sebi204g00093 732 Pfam Leucine Rich repeat 306 319 IPR001611 GO:0005515
Sebi204g00093 732 Pfam Leucine Rich repeat 283 298 IPR001611 GO:0005515
Sebi204g00093 732 PRINTS Leucine-rich repeat signature 354 367 - -
Sebi204g00093 732 PRINTS Leucine-rich repeat signature 285 298 - -
Sebi204g00093 732 SUPERFAMILY Protein kinase-like (PK-like) 520 639 IPR011009 -
Sebi204g00093 732 Gene3D Transferase(Phosphotransferase) domain 1 649 732 - -
Sebi204g00093 732 Gene3D Phosphorylase Kinase; domain 1 508 622 - -
Sebi204g00093 732 Pfam Leucine rich repeat 162 222 IPR001611 GO:0005515
Sebi204g00093 732 Pfam Leucine rich repeat 81 125 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi204g00093 Sebi-Chr204 1268805 1271369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi204g00093 77 647 Receptor kinase-like Gene Family AT5G07280 29.372 7.38e-62 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Sebi204g00093 PK_Tyr_Ser-Thr 1.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi204g00093 - - gmx:100807051 1122.07