Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi204g00090 ATGGCCGAAGTTGAACAAAACCGAAAGCAAGAAAATGAAAAACCAGAAGAAGAAGAGACGAGTCGACGACTCACTGACTCGGCGCCCTCCACCGAGTTACGCACTTCTAGTCCTCCCGATGAAGCGCAACCGAATTCAGAAACCCTAGTTGTCCCCTCGCACGATCACACTGCTCATTTGCAGGGAAGCTCCACTGCGGAGAAAGGTGGCAAAGACGAAAGTAAGGAGCCAGCTGGGCATCCCGGCAAGGAAATTGTTGTAAAAGATGCAGTTGAGGCACCTCAAACGCATCCAAAAAATCTACTTCAGGTGTCTGTGTGTTCAATGTCTGAGCTTTCACCAACTTCTGTTACACAATCTTTATCATCTGCCCCTAGTCCAACTGTGCCGGAAAAGAGACTGTCTCCTCCAAAGGCTGATAGTGTACATGTGCTTGAAGTAGACAAAAGAACTCCTGGTGGTAAAACCTTATCTTCTGTTTCTGTTGCAAGGGCATCTACATCTGATGGATACAATTGGCGGAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGATTGCTGTGCTAAGAAGATTGAATGCTGCAACCATTTAGGCCATGTGATGGATATTGTTTATAGAAGTCAACACAGTCATGATCCCCCGCATAAAACTAATTCCTCTAGGGAAAGTAAATCCCTGCCTTCCAATGAACCTAATATAGAAAACACTATTCCAAAGCAGTCTATCAAAGTTCTAAATGATTCTGAACCATCACCTTCTCCTAAAAATCCCCAACAAGAAACATCTTGCAGTACTGATAAGAAACGACAACACTCATCTAATGGTGAGAATGCAGGGGATGTGGGGATATCAGGTGATGGATACCGATGGCGCAAGTATGGACAAAAAATGGTGAAGGGGAATCCACATCCCAGGATGGAGTGTGTGGCCGTTAGTAGTCAAGAACATCTGACTGCTCTCAGATGCTTGTATGGACTTAAGAAGAATATAATTGATAAAATTGGTGATTTTACTCTTACCTGGCTTGTGGACACACCTTTTGCAAGGCTTCTGTGCCAAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCCGAAAGCACATTGAGACTGCTGTGGATGACTCAAACGCTGTCATTATAACATACAAAGGAGTACATGATCACGACATGCCTGTGCCTAAGAAACGACACGGCCAGCCTAATCCTCCGCTTGTTGCTGCTGCAGCACCTGCTTCAATGAACAATTCCCAGTTGAAGAAAACTGACTCGCCACAGAACCGGAAAACTTCTACTCAATGGTCTGTGGACACAGAAGGAGAATTAACCGGGGAAGCCTTGGACCTTGGTGGTGAGAAAGCAATAGAATCAGCTCGAACTCTTCTGAGTATAGGTTTTGAAATTAAACCATGCTGA 1452 0.4483 MAEVEQNRKQENEKPEEEETSRRLTDSAPSTELRTSSPPDEAQPNSETLVVPSHDHTAHLQGSSTAEKGGKDESKEPAGHPGKEIVVKDAVEAPQTHPKNLLQVSVCSMSELSPTSVTQSLSSAPSPTVPEKRLSPPKADSVHVLEVDKRTPGGKTLSSVSVARASTSDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKKIECCNHLGHVMDIVYRSQHSHDPPHKTNSSRESKSLPSNEPNIENTIPKQSIKVLNDSEPSPSPKNPQQETSCSTDKKRQHSSNGENAGDVGISGDGYRWRKYGQKMVKGNPHPRMECVAVSSQEHLTALRCLYGLKKNIIDKIGDFTLTWLVDTPFARLLCQNYYRCTSAGCPVRKHIETAVDDSNAVIITYKGVHDHDMPVPKKRHGQPNPPLVAAAAPASMNNSQLKKTDSPQNRKTSTQWSVDTEGELTGEALDLGGEKAIESARTLLSIGFEIKPC 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi204g00090 483 SUPERFAMILY WRKY DNA-binding domain 165 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi204g00090 483 MobiDBLite consensus disorder prediction 117 140 - -
Sebi204g00090 483 MobiDBLite consensus disorder prediction 1 96 - -
Sebi204g00090 483 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 109 435 IPR044810 GO:0003700
Sebi204g00090 483 SUPERFAMILY WRKY DNA-binding domain 364 404 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi204g00090 483 ProSiteProfiles WRKY domain profile. 291 404 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi204g00090 483 MobiDBLite consensus disorder prediction 66 87 - -
Sebi204g00090 483 Pfam WRKY DNA -binding domain 298 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi204g00090 483 Pfam WRKY DNA -binding domain 169 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi204g00090 483 Pfam WRKY DNA -binding domain 365 401 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi204g00090 483 MobiDBLite consensus disorder prediction 220 295 - -
Sebi204g00090 483 MobiDBLite consensus disorder prediction 404 450 - -
Sebi204g00090 483 SUPERFAMILY WRKY DNA-binding domain 292 318 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi204g00090 483 Gene3D WRKY domain 155 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi204g00090 483 SMART WRKY_cls 167 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi204g00090 483 SMART WRKY_cls 296 403 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi204g00090 483 MobiDBLite consensus disorder prediction 26 64 - -
Sebi204g00090 483 MobiDBLite consensus disorder prediction 232 273 - -
Sebi204g00090 483 ProSiteProfiles WRKY domain profile. 162 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi204g00090 483 Gene3D WRKY domain 280 405 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi204g00090 483 MobiDBLite consensus disorder prediction 1 25 - -
Sebi204g00090 483 MobiDBLite consensus disorder prediction 423 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi204g00090 Sebi-Chr204 1232316 1237991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi204g00090 102 483 WRKY Transcription Factor Family AT4G30935 44.844 2.39e-97 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi204g00090 WRKY 1.9e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi204g00090 - - gmx:100800480 546.199