Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi204g00075 ATGATCATGGATATAAAGGGTGCAATGATGCCAATATTCCATTATGATCTATTCTTCTTGTTCTTAGTAATCTTTTCATTATTTTCATGCATCCTTGGTGTGCCAAAGGAGCAAGAGCTAGATCGAATCTCAGCTCTACCAGGGCAGCCACCAGTGACATTTTCTCAATTCTCTGGTTATGTCACTGTCAATGAGCAACATGGCAGAGCACTCTTCTACTGGTTCACTGAAGCCACCACTTCCCCTGAGAATAAACCTCTTGTTCTCTGGCTCAATGGAGGGCCTGGTTGCTCATCAGTGGCATACGGGGCATCAGAGGAAATTGGACCATTCCGTATAAACAAAACTGGCTCTTCTCTGTACCTTAACAACTATGCATGGAATAAAGAAGCAAATATCCTCTTTCTTGAATCACCTGCTGGAGTTGGTTTCTCATACACAAATACCAGTTCTGACCTCAAAACTTCTGGGGACAAAAGGACAGGGCACTATGTCCCCCAATTGGCTAAGAAAATCCATGATTATAATAAACAAAATCCCCATATCCTTAATCTTAAAGGGTTCATTGTGGGAAATGCTGTGACTGATGACTACTATGATGGGGTGGGAACCGTTACATATTGGTGGAGCCACTCTATGATATCTGATCAATCATACAAATCTATCCTCAAATATTGTAATTTCACTGAAAGAAAAACAACTAAAAAATGTGATGATGCTGTGAGTTATGCTGTGAACCATGAATTTGGGAACATTGATCAGTACAGTATCTATACCCCTGCATGCACAACACCACACAATGATACTCTAAGGCATGTTAGGTTCAAGAGTACAATGTTACATAGGATTGCTGGGTATGATCCTTGTACTGAAGATTATGCAGAGAAATATTATAATCGCCATGATGTGCAGAAAGCAATGCATGCAAATGTTACAAACATTCCTTACAAATGGACTGCTTGCAGTGGTGTGCTCAATAAACATTGGCAGGATTCTGAAGTTTCTATATTGCCCATTTACAAAGAGTTAATTGCAGCGGGTTTGAGAATCTGGGTTTTCAGTGGAGACACAGATTCGGTAGTTCCAGTAACTGCTACAAGGTTTTCTCTCAACCATCTCAACCTCACCATCAAAACTCGTTGGTACCCATGGTACTCAGGGGAACAGGTAGGAGGATGGACAGAGGTGTATGATGGATTAACATTTGCAACTGTAAGAGGGGCTGGGCATGAAGTTCCATTATTTCAGCCAAAACGAGCTTACATACTTTTCAGGTCATTTTTGGCAGGGAAACAACTACCAAAATCTTGA 1311 0.4096 MIMDIKGAMMPIFHYDLFFLFLVIFSLFSCILGVPKEQELDRISALPGQPPVTFSQFSGYVTVNEQHGRALFYWFTEATTSPENKPLVLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYLNNYAWNKEANILFLESPAGVGFSYTNTSSDLKTSGDKRTGHYVPQLAKKIHDYNKQNPHILNLKGFIVGNAVTDDYYDGVGTVTYWWSHSMISDQSYKSILKYCNFTERKTTKKCDDAVSYAVNHEFGNIDQYSIYTPACTTPHNDTLRHVRFKSTMLHRIAGYDPCTEDYAEKYYNRHDVQKAMHANVTNIPYKWTACSGVLNKHWQDSEVSILPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTIKTRWYPWYSGEQVGGWTEVYDGLTFATVRGAGHEVPLFQPKRAYILFRSFLAGKQLPKS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi204g00075 436 Gene3D alpha/beta hydrolase 159 264 IPR029058 -
Sebi204g00075 436 Gene3D alpha/beta hydrolase 37 158 IPR029058 -
Sebi204g00075 436 ProSitePatterns Serine carboxypeptidases, histidine active site. 400 417 IPR033124 GO:0004185
Sebi204g00075 436 Gene3D - 336 430 - -
Sebi204g00075 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 400 413 IPR001563 GO:0004185|GO:0006508
Sebi204g00075 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 135 IPR001563 GO:0004185|GO:0006508
Sebi204g00075 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 146 IPR001563 GO:0004185|GO:0006508
Sebi204g00075 436 FunFam Carboxypeptidase 336 430 - -
Sebi204g00075 436 Pfam Serine carboxypeptidase 48 158 IPR001563 GO:0004185|GO:0006508
Sebi204g00075 436 Pfam Serine carboxypeptidase 161 429 IPR001563 GO:0004185|GO:0006508
Sebi204g00075 436 SUPERFAMILY alpha/beta-Hydrolases 41 433 IPR029058 -
Sebi204g00075 436 Gene3D - 289 326 - -
Sebi204g00075 436 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 417 IPR001563 GO:0004185|GO:0006508
Sebi204g00075 436 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi204g00075 Sebi-Chr204 1071633 1078038 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi204g00075 294 433 Calmodulin-binding Proteins AT2G22960 31.206 1.61e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi204g00075 K16297 - gmx:100785391 729.939