Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi204g00071 ATGGCAACACAATATGAAGTTGAGCATCCAAACAAGGCCTTCGGATGGGCAGCAAGAGATACTTCTGGTTTTCTCTCCCCTTTCAATTTCTCCAGAAGGGAAACGGGTGAGAAAGATGTGGCATTCAAAGTGTTGTACTGTGGGATATGCCACTCAGATCTCCACATGGTGAAGAATGAATGGGGCATTTCCACCTATCCACTAGTCCCAGGTGACAGAGGTGGGAAGCAAAGTACAAAGTTCAAAATTGGGGACAGAGTAGGTGTGGGATGCATGATTGCTTCTTGCCGCACATGTCAAAAGTGTGTTGATAATCTTGAGAATTACTGCCCACAATTTACTCACACTTATAGTACCAAATACATTGATGGCACCACCACCTATGGAGGCTACTCTGACTCTATGGTAGCAGATGAGCACTTTGTGGTTCAAATTCCTGATAACATGCCTCTTGATGCTGCTGCACCTCTTCTTTGTGCTGGGATCACAGTGTATAGCCCTCTTAGATATTTTGGACTTGACAAGCCTGGTCTCCATGTGGGTGTGGTTGGTCTTGGTGGGTTAGGCCATGTGGCTGTCAAGTTTGCCAAAGCTTTTGGGGCTAATGTGACAGTTATTAGTACATCACCCAACAAACAGAAGGAAGCAATTGAACACCTTGGAGCTGACTCCTTTCTAATAAGCCGTGACCAAGATCAAATGCAGGCTGCAATGGGCACTATGGATGGTATTATTGACACAGTTTCTGCTAATCATCCTCTGTTACCTCTGCTTGGTTTGTTGAAGTCTCATGGAAAGCTTGTAATGGTGGGAGCACCAGAGAAGCCTCTGGAGTTGCCAGTATTTCCTTTACTTATGGGGAGAAAGATAGTAGCTGGCAGTAACATTGGGGGGATGAAGGAGACACAAGAGATGATTGACTTTGCAGCAGAACATAATGTAAAACCTGACATTGAAGTCATTCCTATTGATTATGTCAACACAGCAATGGAGCGTCTCCTTAGAGCCGATGTAAAATATAGATTTGTGATTGACATTGGAAACACACTGAAACCAAGCTCTTAG 1065 0.4432 MATQYEVEHPNKAFGWAARDTSGFLSPFNFSRRETGEKDVAFKVLYCGICHSDLHMVKNEWGISTYPLVPGDRGGKQSTKFKIGDRVGVGCMIASCRTCQKCVDNLENYCPQFTHTYSTKYIDGTTTYGGYSDSMVADEHFVVQIPDNMPLDAAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHVAVKFAKAFGANVTVISTSPNKQKEAIEHLGADSFLISRDQDQMQAAMGTMDGIIDTVSANHPLLPLLGLLKSHGKLVMVGAPEKPLELPVFPLLMGRKIVAGSNIGGMKETQEMIDFAAEHNVKPDIEVIPIDYVNTAMERLLRADVKYRFVIDIGNTLKPSS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi204g00071 354 CDD CAD1 14 345 IPR047109 GO:0016616
Sebi204g00071 354 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 149 315 IPR036291 -
Sebi204g00071 354 SMART PKS_ER_names_mod 17 344 IPR020843 GO:0016491
Sebi204g00071 354 FunFam Cinnamyl alcohol dehydrogenase 160 316 - -
Sebi204g00071 354 Pfam Zinc-binding dehydrogenase 187 310 IPR013149 -
Sebi204g00071 354 Gene3D - 16 346 - -
Sebi204g00071 354 SUPERFAMILY GroES-like 21 177 IPR011032 -
Sebi204g00071 354 PANTHER ALDEHYDE REDUCTASE 6 349 IPR047109 GO:0016616
Sebi204g00071 354 Pfam Alcohol dehydrogenase GroES-like domain 38 145 IPR013154 -
Sebi204g00071 354 FunFam Putative cinnamyl alcohol dehydrogenase 6 317 346 - -
Sebi204g00071 354 Gene3D - 160 316 - -
Sebi204g00071 354 FunFam Uncharacterized protein 16 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi204g00071 Sebi-Chr204 1036236 1038465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi204g00071 11 353 Monolignol Biosynthesis Gene Families AT4G37990 70.286 3.97e-168 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi204g00071 K23232 - gmx:100816901 589.726