Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi204g00070 ATGCAGCAAGGTGATCCAACGGTCCTGAGCTTGAGGCCTGGTGGTGGACGTGGCGGCGGAAGCAGGCTTCTCGGAATGGAAGTTAAGATCCATAAGACAAAGGAGAAACCTGAAGTTGAATGTCCTGATTCTTGGTGGACTGGAGATTCACGGTTTGAAGGTCGTGAGCGTGTGCGATATACCAGAGAACAGCTTTTACAGCTTAGAGAGGCTGTCGAGGTCCCTGACGATATTCTAAAGATTAAACAAGACATAGAAGCTGAACTTTTCGGTGAAGATCAAAGTTGGGGCCGTGCTGAAAGCAATCCTCCACATCAATTACAAAATCGATATTCTGAGCCAGATAACCGTGACTGGCGTGGTCGTTCTGGACAACTTCCTCCTAATCCAGATGAGAGGTCTTGGGAAAACCTCAGAGATAACAGGGAGCTTGGTAATAGATTTGACTCTAGAAACCAGGATGCTAGTCAGGTTAATCGCCAAGATCAACTTAATTCTCAGTTTGCAAGGGCACAGATTTCTTCTAATCAAGGGGGAGGATCTGTGCCTACTCTAGCCAAGGCTGAAGTTCCATGGTCAGCTAGAAGGGGAAGCCTCTCTGAGAAGGATCGCGTCCTGAAGACTGTAAAAGGCATACTAAATAAGTTGACTCCTGAGAAGTTTGATCTCTTGAAGGGTCAATTAATCGATTCTGGCATTACATCAGCTGACATCTTGAAGCTGTGCTCTGATCTTAATGAGAAGCTTCCTCCATTCCCATCTGAAGAACCTGGTGGGAAAGAAATCACTTTTAAGAGAGTACTCTTGAATATTTGCCAGGAGGCTTTTGAAGGTGCTTACAATATGAGGGAGGAAATAAAACAGATGACTGCCCCTGAGCAGGAGATGGAGCGTACAGACAAGGAAAGACTGATCAAGCTTCGCACCCTTGGAAATATCCGTTTAATTGGTGAGCTTTTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAGCTTTTAGGACCCCCAGACAGCAAGGCTTGTCCAGTTGAGGAAAATGTTGAAGCCATTTGTCAGTTTTTCAATACTATTGGTAAGCAGCTTGATGAAAGTCCAAAATCGCGGCGAATAAATGATATGTATTTTAGCCGTTTGAAAGAACTATGCACAAACCCCCAACTTGTACCACGGCTCAGGTTCATGCTTCGGGATGTTCTAGATTTGCGTGCAAATAACTGGGTTCCTAGACGCGAAGAGATGAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCAGAAAAAAATCTTGGATTGCGCCCAGGTGCTACTGCTAATATTAGAAATGCCCGTGGAGGTGTTCAAGGAAATGTCGGCCCAGGGGGCTTCCCCATTGCTCGACCAGGTACAGGGGGTTTGATGCCTGGAATGCCAGGGACAGGAAGATGCCTGGGATGCCTGGAATTGATAATGATAACTGGGAGATTCCTAGGACTAGATCTATGCCAAGAGGAGACTTGTAGTGTTGGTATTATAAGTGGAAGAAGTAGTGCCCTTGTTCATGGAGGTGGTCCAGTTTCTGCTCGCCCATCAAACTTTGGTTCAGGTATTGAGGCTACACCTCAATTCTCTTCACCTGCTAAACCAGTTTCTGCTGTGTCCTCAGAGAAGCCACAGGCTCCAGCTGTAAAATTGAATCTTGATGATCTTCACCGCAAAACCGTCTCTCTTCTGGAAGAATATTTCAGTGTTCGGATTTTGGAAGAGGCATTACAATGTGTGGAGGAATTAAAATCTCCAGCTTACCACCCTGAGTTTGTTAAGGAAGCCATTTCTCTTGCACTTGATAAAAGCCCACCATGTGTTGAACCCGTTGCCAATCTACTTGAGTATCTCTTTATTAAGAAGATTCTTACAGCCAGAGACATAGGGACTGGCTGTTTGTTATTTGGTTCTTTGCTGGATGACATTGGCATAGATTTACCTAAAGCACCAAGTAATTTTGGTGAGATAATTGGGAAACTAATTTTGGCTGGAGGGTTGGATTTTAAGGTGATGGCAGAGATTCTCAAGAAAGTGGATGATGACCTGTTTCAGAGAGCAATATTTGACAGTGCAGTACGAGTAATTAGATCTGCCTCTGGGCAAGCTGTATTGGAATCACAAATATCTGATATTGAGGCCTGCCAGAGTCTGCTCAAGTGA 2196 0.4467 MQQGDPTVLSLRPGGGRGGGSRLLGMEVKIHKTKEKPEVECPDSWWTGDSRFEGRERVRYTREQLLQLREAVEVPDDILKIKQDIEAELFGEDQSWGRAESNPPHQLQNRYSEPDNRDWRGRSGQLPPNPDERSWENLRDNRELGNRFDSRNQDASQVNRQDQLNSQFARAQISSNQGGGSVPTLAKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKLCSDLNEKLPPFPSEEPGGKEITFKRVLLNICQEAFEGAYNMREEIKQMTAPEQEMERTDKERLIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKACPVEENVEAICQFFNTIGKQLDESPKSRRINDMYFSRLKELCTNPQLVPRLRFMLRDVLDLRANNWVPRREEMKAKTITEIHSEAEKNLGLRPGATANIRNARGGVQGNVGPGGFPIARPGTGGLMPGMPGTGRCLGCLELIMITGRFLGLDLCQEETCSVGIISGRSSALVHGGGPVSARPSNFGSGIEATPQFSSPAKPVSAVSSEKPQAPAVKLNLDDLHRKTVSLLEEYFSVRILEEALQCVEELKSPAYHPEFVKEAISLALDKSPPCVEPVANLLEYLFIKKILTARDIGTGCLLFGSLLDDIGIDLPKAPSNFGEIIGKLILAGGLDFKVMAEILKKVDDDLFQRAIFDSAVRVIRSASGQAVLESQISDIEACQSLLK 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi204g00070 731 Pfam MA3 domain 568 679 IPR003891 -
Sebi204g00070 731 ProSiteProfiles MI domain profile. 566 688 IPR003891 -
Sebi204g00070 731 FunFam Eukaryotic translation initiation factor isoform 4G-2 560 721 - -
Sebi204g00070 731 Gene3D - 206 423 - -
Sebi204g00070 731 SMART if4_15 206 410 IPR003890 GO:0003723|GO:0005515
Sebi204g00070 731 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 33 728 IPR045208 GO:0003743
Sebi204g00070 731 Gene3D - 560 727 - -
Sebi204g00070 731 SMART ma3_7 567 679 IPR003891 -
Sebi204g00070 731 MobiDBLite consensus disorder prediction 93 136 - -
Sebi204g00070 731 Pfam MIF4G domain 239 410 IPR003890 GO:0003723|GO:0005515
Sebi204g00070 731 SUPERFAMILY ARM repeat 200 413 IPR016024 -
Sebi204g00070 731 SUPERFAMILY ARM repeat 563 710 IPR016024 -
Sebi204g00070 731 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi204g00070 Sebi-Chr204 1025421 1031485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi204g00070 1 729 Eukaryotic Initiation Factors Gene Family AT5G57870 58.682 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi204g00070 K03260 - gmx:100816500 1087.4