Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi204g00068 ATGGAAGCTAAGACTGGACTTTTTGCAGGGTCTAATAACAGCAATGATCTTGTGATCATCCAAGGACATGAGGAGCCTAAGCCTGTGAAGAACTTAGATGGCCATGCTATGAGTATGAAAGAAGGGAAGGGACTCAAGTTTGCCCTCAGTGCCATACAAGATACAAGCGTATCAAAGGAAAAGTACAAGCTTAAGTATGAGGAGATGCTGCAAGGGAAGATAAACCATGGAGATGATCATGATAATGATAAATCAACAAAGGTGAATGGGGAGCTTCCCACATCTTCTCACAGCATTGGAGAACCTGGTGGTGCAAAAGTGGATGGCAAGGAGAAAACAGATGACTGGAAGTTGTCCCAAGGCAATCTGTGCCCTGAAACTGATGCCTCAGTTGATCCTGAAAAGGGCATGAAAGATGAAACTAGACAGCCACTCTCAAGGAAAGTACCAATCCCTTCAGGCAAACTCAGTCCTTATAGAATGATGGTTGTGGCTCGGCTCCTCCTCCTAATACTCTTCATTCAGTACAGAATCTTCCACCCAGTACCTGATGCAATTGGACTCTGGTTCATATCTGTAATGTGTGAAATCTGGCTTGCATTGTCATGGCTAGTTGATCAGCTTCCCAAATGGTTTCCCATCAATCGTGAGACATACCTTGATCGTCTTTCAATCAGGTTTGAACCGGAAAACAAACCCAATATGCTTTCTCCAATAGATATCTTTGTCACAACAATAGATCCAATCAAGGAACCCCCTCTAGTTACAGCCAATACTGTTCTTTCAATCTTGGCCTTGGATTATCCAGCTCACAAGATCTCATGCTACGTTTCTGATGATGGAGCTTCCATGCTCACCTTTGAAGCTCTTCAAGAAACTGCTGAATTTGCTCAAAAGTGGGTACCTTTCTGCAAAAAATTCAATGCAGAACCTAGAGCCCCAGAGAAGTACTTTTCTGAGAAGATAGATTTTCTGAAGGATAAGCTTCAGTCCACATATGTAAAAGAACGTCGTACTATGAAGAGAGAATATGAAGAATTTAAGGTGAGGATAAATGCACTTGTGGCTAAATCCCTGAGAGTTCCCCTAGAAGGATGGACTATGAAAGATGAGACACCATGGCCAGGGAACAATACAAAAGATCATCCAGGTATGATACAAATCCTTCTTGGTCATAATGGAGGCCATGAAGGTAATGACCTTCCTTGTCTTGTCTACATGTCTCGAGAGAAAAGGCCTGCATTTCAACACCACAGCAAAGCTGGTGCAATCAATGCCTTGCTTCGTGTATCAGCAGTGCTAAGCAATGCTCCTTTTGTCCTGAACTTGGACTGCAATCATTATGTGAATAACAGCAAAATTATTAACTTGAGGTGCCTAGATGGAATTCAGGGACCTGCTTTTGTTGGTTCAGGATGTATCTTCAGAAGGAAAGCTTTATATGGCTTTGATCCTCCAAAGGCTTCAAAACGCCCACGAATAGTACAAGTGCACTCAAAACAGGATGAAAATGGAGAAGATGCAAGTCTAACAGCAGCAACAGATGAAGACATGGAGCTTTTGAAGTCACAGATGAATGATGAAAGTAAATTTGGAAAGTCTACACTTTTCATGAATTCTTCATTAACAGAAGAGGGTGGTGCTGATTCTTCTTCAACTCAGGAAGCCCTGCTCAAAGAAGCCATTCATGTCATGAGTAGCAGATACGAAGACAGAACTCTTTGGGGATACGAGGTGGGTTTGAGCTATGGATCTATAGCAACAGATATTCTGACAAGTTTCAAGATGCACACTCGTGGTTGGAGATCTGTATACTGCATGCCAAAGAGACCTGCATTCAGGGGTACAGCTCCTATCAACCTTACAGAAAGACTTAACCAGGTGCTTAGATGGGCAGTAGGATCACTTGAGATTCTATTCAGCCGCCATTGCCCACTATGGTATGGATTCAATGAAGGAAGACTCAAGGGGCTCCAGAGGATTGCCTATATTAACAGCACTGTCTACCCTTTCAGCTCAATTCCCCTCCTCATGTATTGCCTTGTTCCTGCCATCTGCTTGCTCACTGATAAATTCATCACACCATCGTTTCCTGAGATCAATTTCACTGATAGAACCATTGTTCAGGTGGGAACTTTTGCAAGTCTAATCTTCACTGCCCTCTTCATCTCAATCTTTGCATCTGCTATTCTTGAATTGAGATGGAGTGGAGTTAGCCTTGAGGAATGGTGGAGAAATCAGCAATTTTGGGTCATTGGCAGTGTGTCTGCAAACCTCTTTTCCATTCTACAAGGCCTAATGGGAGCCCTGGGTAAATTTAATGCAAACTTCAGTGTTGTATCAAAGGCACCAGATGATGTGGAGTTTTGTGAATTGTACACCATTAGATGGACTGCATTACTAATACCTCCAACCACAATCATAATAATCAACCTCATTGGTATTGTAGCTGGGTTCACAGATGCCATAAACAGTGGTGAACATTCTTGGGGAGCACTGCTTGGGAAGCTCTTCTTTTCTTTATGGGTTATTGCTCACTTGTACCCATTCCTTAAAGGTCTGATGGGTAGGCAGAACAGAACACCAACTCTTATTGTCATATGGTCTGTCCTTTTGGCTTCTATCTTCTCCTTGGTTTGGGTAAGAGTTGACCCTTTCGTGTTGAAAACTAAGGGGCCTGATGTCAAGCAATGTGGAATCAGTTGCTGA 2709 0.4278 MEAKTGLFAGSNNSNDLVIIQGHEEPKPVKNLDGHAMSMKEGKGLKFALSAIQDTSVSKEKYKLKYEEMLQGKINHGDDHDNDKSTKVNGELPTSSHSIGEPGGAKVDGKEKTDDWKLSQGNLCPETDASVDPEKGMKDETRQPLSRKVPIPSGKLSPYRMMVVARLLLLILFIQYRIFHPVPDAIGLWFISVMCEIWLALSWLVDQLPKWFPINRETYLDRLSIRFEPENKPNMLSPIDIFVTTIDPIKEPPLVTANTVLSILALDYPAHKISCYVSDDGASMLTFEALQETAEFAQKWVPFCKKFNAEPRAPEKYFSEKIDFLKDKLQSTYVKERRTMKREYEEFKVRINALVAKSLRVPLEGWTMKDETPWPGNNTKDHPGMIQILLGHNGGHEGNDLPCLVYMSREKRPAFQHHSKAGAINALLRVSAVLSNAPFVLNLDCNHYVNNSKIINLRCLDGIQGPAFVGSGCIFRRKALYGFDPPKASKRPRIVQVHSKQDENGEDASLTAATDEDMELLKSQMNDESKFGKSTLFMNSSLTEEGGADSSSTQEALLKEAIHVMSSRYEDRTLWGYEVGLSYGSIATDILTSFKMHTRGWRSVYCMPKRPAFRGTAPINLTERLNQVLRWAVGSLEILFSRHCPLWYGFNEGRLKGLQRIAYINSTVYPFSSIPLLMYCLVPAICLLTDKFITPSFPEINFTDRTIVQVGTFASLIFTALFISIFASAILELRWSGVSLEEWWRNQQFWVIGSVSANLFSILQGLMGALGKFNANFSVVSKAPDDVEFCELYTIRWTALLIPPTTIIIINLIGIVAGFTDAINSGEHSWGALLGKLFFSLWVIAHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRVDPFVLKTKGPDVKQCGISC 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi204g00068 902 Pfam Cellulose synthase 455 896 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sebi204g00068 902 MobiDBLite consensus disorder prediction 489 513 - -
Sebi204g00068 902 MobiDBLite consensus disorder prediction 73 87 - -
Sebi204g00068 902 MobiDBLite consensus disorder prediction 131 145 - -
Sebi204g00068 902 Coils Coil 337 357 - -
Sebi204g00068 902 MobiDBLite consensus disorder prediction 73 149 - -
Sebi204g00068 902 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 228 335 IPR029044 -
Sebi204g00068 902 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 142 455 - -
Sebi204g00068 902 SUPERFAMILY Nucleotide-diphospho-sugar transferases 251 683 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi204g00068 Sebi-Chr204 1003564 1008469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi204g00068 59 902 Cell Wall Biosynthesis AT5G17420 59.719 0.0 1147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi204g00068 K10999 - gmx:100777270 1429.85