Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi204g00067 ATGGCCTCAAAAACTAGAAGTTCTACCATTCAAGTGTCTCTCATAGTAGCTTTTCTCATCGCCAATGTTGTTTTATCTGATGATAGTGTACCAATTCCTGCTGACAAGTCCCAATTGGAAACTTGGTTTAAAAGCAACGTGGCGCCTTTAGGTCAAAGAAAAAACAGCTTGGACCCTGCACTTGTGGCTGCAGAGGACGATGCTAAGGTTGTGAAGGTCATGCAAGATGGCTCTGGGGATTTCAAGACCATCACTGATGCCATTGATAACATACCTAATGGGAACACCAAGCGTGTGATTGTGTATATTGGTGGTGCAAATTATAATGAGAAAATCAAAATTGAAAGGACAAAACCTTTTGTCACCTTGTATGGGGAACCAGAGAACATGCCAAACTTGACGTATGGGGGCACTGCACAACAATATGGCACTGTTGACAGTGCAACTCTGATTGTCGAATCAGATTACTTTGTGGCCGCCAACATCATAATCTCGAATTCTGCACCAAGACCTGATGGAAAAAGGCAAGGAGCTCAAGCGGTTGCATTGAGGATTTCTGGTGACAAAGCAACATTTTATAATTGCAAGCTACTTGGATTCCAAGACACTGTTTGTGATGATAAGAATAGACATCTTTTCAAAAATTGCTTAATTCAAGGCACAGTGGATTTTATTTTTGGAAGTGGGAAGTCACTATATTTGAACACTGAATTGAGAGCGCTTAGCAATAGTGGGATGACTGTGATAGTGGCACAAGCAAGAAAAAGTGAGACAGAGGATAATGTCTACTCATTTGTGCATTGCAGTATTACTGGAACTGGAACTGGCACTTTCTTGGGTAGAGCGTGGATGTCTCATTCCAAAGTGATATTTGCTTACACAACTATGAGCAGTATTGTGAATCCAGCAGGGTGGAGTAACAACAGACACCCTGAATATGACAGTACTATGTATTTTGGAGAGTACCAGAATGAAGGACCGGGTGCAGATCCCAAAGTGCGTGCCTCTTTCACAAAGCAACTAAGTGATGCAAAGGTCAAATCTTTCATAACTCTTGAAATGATTGAAGGCTCTAAATGGTTACTTCCTCCTCCAACTCCCAAAGTCTAA 1110 0.4162 MASKTRSSTIQVSLIVAFLIANVVLSDDSVPIPADKSQLETWFKSNVAPLGQRKNSLDPALVAAEDDAKVVKVMQDGSGDFKTITDAIDNIPNGNTKRVIVYIGGANYNEKIKIERTKPFVTLYGEPENMPNLTYGGTAQQYGTVDSATLIVESDYFVAANIIISNSAPRPDGKRQGAQAVALRISGDKATFYNCKLLGFQDTVCDDKNRHLFKNCLIQGTVDFIFGSGKSLYLNTELRALSNSGMTVIVAQARKSETEDNVYSFVHCSITGTGTGTFLGRAWMSHSKVIFAYTTMSSIVNPAGWSNNRHPEYDSTMYFGEYQNEGPGADPKVRASFTKQLSDAKVKSFITLEMIEGSKWLLPPPTPKV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi204g00067 369 Pfam Pectinesterase 71 357 IPR000070 GO:0030599|GO:0042545
Sebi204g00067 369 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Sebi204g00067 369 Gene3D - 66 364 IPR012334 -
Sebi204g00067 369 FunFam Pectinesterase 66 363 - -
Sebi204g00067 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 63 361 - -
Sebi204g00067 369 SUPERFAMILY Pectin lyase-like 68 363 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi204g00067 Sebi-Chr204 994623 996216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi204g00067 9 365 Carbohydrate Esterase AT1G69940 54.342 7.95e-149 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi204g00067 K01051 - gmx:100786427 598.586