Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi204g00029 ATGACTCTGTTCACAAAACAACACTTAATTTTGGTGATGTTCCTAATAACTGCAAAAGCAGCATCTAAAGCCAGGCCAGATGAGTGCCCAACAAGCTGTGGCTCTCTCAAAATTCCATACCCATTTGGGATGAGTGAGGGTTGCTACTTGGACCACTCTTTCTTCATCAATTGCACCCATAACCATAATCCCATCCCACACCTTCCACACCCAAATACCAACATGATTGTCTTAAACATATCACTAAATGACGGGGAACTCCTCGTTTCAAGTCCCGTAGCACGTTATTGTTTCAGGAAGAGAGATACTATTCAAAGTTCTCTCCAAGAGAGAAAACAAATGTTCAACTTGACTCATTTTTCGGTGTCACCCACTCGGAACAAATTCACTGCTGTTGGTTGCAACACAATTGGAGTATATAAGGGTGATGCTTCTCTTTCTCTAACAAAAAACGTTACAGAAGGAACAGGATCAGGGGCATGCCTTTCCTTATGCAACAAAATTGATGAGGTCAGTAATGGGTCTTGTTCTGATACTGGCTGTTGTCAAATTCCTATATACAAACAATTGTCCTATAATGTCGTAATAGCCACAACGAGTGTGGAATTCGATTCCGGGGTACATGAGTATCCATGTAGCTATGCATTCATAGGTGAAGAAGGGGCCTATAGCTTCTCGTCGACGGATCTAATTAGGAATAATTTAGAGAAGAAGAAGGTACCTATGGTGCTTGATTGGGCGGTGGGAAATGAAACGTGCCAAGAGGCCAAACAAAATGAGACAAGGTACGCGTGCAAAGCAGACAAGAGTGAATGTCTCAATTCAACCAACAGAATGGGATATCGTTGCAAATGCCTCTCGGGGTTTGAAGGAAACCCGTATCTCTATGATGGATGTCAAGACATCAAAGAATGCAACATGGAACCTAGCCCCTGCAGCGGAATATGCCACGAACTTGAAGGCAACTATACTTGTTCATGCCCGGAGGGATACGAAGTAGATGGGTATAGAAGTGGCATAGGTTGCTATCCCAAAGGCAAATCCAGGACGAAACTTGCACATATAATTGCAGTGGGTGGGAGCTTGGGTATATTGGCACTGCTTGTGGGAAGCTTGTACTTGTATTCCAAACTGAGAAAAGCAAAGCTCAATAAAATCAGACAAAAGTATTTTCAACAAAATGGCGGCATATTGTTAAAACAGCGAATTGCTGCACATCAAGGGTCCACAGAAAGAGCTACAATCTTCACTGCTCAAGAGATGAAGAAAGCCACCAACAACTATGATGAGGATAGAGTCATAGGTAAAGGGGGCCATGGAACAGTGTACAAAGGTGTTTTATCAGATAACAGAGTTGTTGCCATCAAGAAGACCAAGATTTCAAGTCAAACTGAGATTGAGCAATTCATCAACGAGGTACTTGTGCTTTCCCAAACCAACCACCGGAATATTGTGAAGCTCCTAGGTTGTTGTTTGGAGATAGAGGTTCCTCTTCTTGTTTATGAATTCATCACTAATGGGACACTTTCAGAACACATTCATGTTGAAGGTCAAGCCTCTCAACTTTCATGGCAAGTACGTTTGAGAGTTGCAGCTGAGACTGCAGAAGCCCTTGCATACTTGCACTCTGCTGCCTCTACACCAATCATACATAGAGATGTCAAAACTGAAAACATACTACTAGATGATAATCTCACAGCCAAAGTTTCTGATTTTGGAGCTTCAAAGCTTATTCCTATTAATAAAACACAATTAACAACCTTAGTGCAGGGTACATTGGGTTATCTTGATCCTGAATACTTCCAATCAAGTCAGTTAACAGAGAAGAGTGATGTCTACAGTTTTGGGGTTGTCTTGGCAGAGCTATTGACAAGCATGAAGGCACTTTCATTCATGAGGCCTGAGAGTGATAGAAATCTATCTAACTACTTTGTTTCTTTGCTGAGTGAGGGTCGCTTGCCTCAAATCCTTGACAACAACATAGTAAATGATGCAAATTTTGAGCAAATAATGGAAGTGGCTTATCTTGTGAAAAGGTGTCTTATGCTTAAGGGAGAGGAAAGACCAACTATGAAAGAAGTTGCAATGGAATTGGAGAGAATAAGGACTGTGGAAAAACTTTCATCAACTGCAACCAATTTGTCCTTGGAAGAAACTGAGTACTCCTTCAGAGTACCAAGGTCCCCCTACACCACTGATGGTAGACGGGGCAGTGGTGGCAGCAGCATAATTACTGGGGTTGATAGTATTCAAACCCAGGTTTTGGAGCCACTAGATGAGGGACGATAA 2289 0.4211 MTLFTKQHLILVMFLITAKAASKARPDECPTSCGSLKIPYPFGMSEGCYLDHSFFINCTHNHNPIPHLPHPNTNMIVLNISLNDGELLVSSPVARYCFRKRDTIQSSLQERKQMFNLTHFSVSPTRNKFTAVGCNTIGVYKGDASLSLTKNVTEGTGSGACLSLCNKIDEVSNGSCSDTGCCQIPIYKQLSYNVVIATTSVEFDSGVHEYPCSYAFIGEEGAYSFSSTDLIRNNLEKKKVPMVLDWAVGNETCQEAKQNETRYACKADKSECLNSTNRMGYRCKCLSGFEGNPYLYDGCQDIKECNMEPSPCSGICHELEGNYTCSCPEGYEVDGYRSGIGCYPKGKSRTKLAHIIAVGGSLGILALLVGSLYLYSKLRKAKLNKIRQKYFQQNGGILLKQRIAAHQGSTERATIFTAQEMKKATNNYDEDRVIGKGGHGTVYKGVLSDNRVVAIKKTKISSQTEIEQFINEVLVLSQTNHRNIVKLLGCCLEIEVPLLVYEFITNGTLSEHIHVEGQASQLSWQVRLRVAAETAEALAYLHSAASTPIIHRDVKTENILLDDNLTAKVSDFGASKLIPINKTQLTTLVQGTLGYLDPEYFQSSQLTEKSDVYSFGVVLAELLTSMKALSFMRPESDRNLSNYFVSLLSEGRLPQILDNNIVNDANFEQIMEVAYLVKRCLMLKGEERPTMKEVAMELERIRTVEKLSSTATNLSLEETEYSFRVPRSPYTTDGRRGSGGSSIITGVDSIQTQVLEPLDEGR 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi204g00029 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 549 561 IPR008271 GO:0004672|GO:0006468
Sebi204g00029 762 SMART egfca_6 301 343 IPR001881 GO:0005509
Sebi204g00029 762 SMART egfca_6 257 300 IPR001881 GO:0005509
Sebi204g00029 762 FunFam Wall-associated receptor kinase 2 504 721 - -
Sebi204g00029 762 SUPERFAMILY EGF/Laminin 299 335 - -
Sebi204g00029 762 FunFam Wall-associated receptor kinase 2 398 503 - -
Sebi204g00029 762 Gene3D Transferase(Phosphotransferase) domain 1 504 721 - -
Sebi204g00029 762 CDD EGF_CA 301 332 - -
Sebi204g00029 762 ProSiteProfiles Protein kinase domain profile. 428 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi204g00029 762 SMART serkin_6 428 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi204g00029 762 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 706 IPR045274 GO:0007166
Sebi204g00029 762 CDD STKc_IRAK 434 701 - -
Sebi204g00029 762 Gene3D Phosphorylase Kinase; domain 1 394 503 - -
Sebi204g00029 762 FunFam Wall-associated receptor kinase 2 251 303 - -
Sebi204g00029 762 ProSitePatterns Protein kinases ATP-binding region signature. 434 457 IPR017441 GO:0005524
Sebi204g00029 762 Gene3D Laminin 250 338 - -
Sebi204g00029 762 SUPERFAMILY Protein kinase-like (PK-like) 412 705 IPR011009 -
Sebi204g00029 762 Pfam Wall-associated receptor kinase galacturonan-binding 29 89 IPR025287 GO:0030247
Sebi204g00029 762 Pfam Protein kinase domain 428 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi204g00029 762 SMART egf_5 304 343 IPR000742 -
Sebi204g00029 762 SMART egf_5 252 300 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi204g00029 Sebi-Chr204 387945 392773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi204g00029 9 762 Receptor kinase-like Gene Family AT1G21230 43.627 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Sebi204g00029 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi204g00029 - - vun:114190859 806.979