Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi204g00016 ATGACAATGCAGGTGCGGTTGATTGGATATAGTATCGAGGGCTCTCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACTTAAGCCAACATTTGCGTGGTTCAGGTAGAGATCCACTGTCATGGGCTGCAAGGGTGCAGATTGCTTTGGATTCCGCCAGAGGTCTTGAATATATTCATGAGCATACAGTGCCTGTATATATTCATCGTGACATAAAGTCAGCAAACATATTAATAGACAAAAACTTCCGGGGGAAGGTTGCTGATTTTGGATTGACCAAACTGACAGAAGTTGGAAGCTCATCGCTTCCCACTGGTCGTCTTGTCGGAACATTTGGATACATGCCACCAGAGTATGCTCAATATGGAGATGTTTCTCCCAAAGTAGATGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCAGCTAAGGAAGCAATCGTCAAGACAAGCGAATCTATTGCTGACTCAAAGGGCCTCGTAGCTTTGTTTGAAGAAGTTCTTAGTCAGCCTGATCCTACAGAAGATCTTTGCAAACTAGTGGATCCAAGGCTTGGGGATAACTACCCTATTGATTCAGTTCGCAAGATGGCTCAACTAGCCAAAGCATGTACACAGGACAATCCCCAACTGCGTCCAAGTATGAGATCCATTGTTGTTGCTCTTATGACACTTTCTTCAACTACAGATGATTGGGATGTTGGCTCCTTCTATGAAAATCAAAATCTTGTGAATCTTATGTCAGGAAGATAG 756 0.422 MTMQVRLIGYSIEGSLFLVYEYIENGNLSQHLRGSGRDPLSWAARVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKTSESIADSKGLVALFEEVLSQPDPTEDLCKLVDPRLGDNYPIDSVRKMAQLAKACTQDNPQLRPSMRSIVVALMTLSSTTDDWDVGSFYENQNLVNLMSGR 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi204g00016 251 SMART serkin_6 3 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi204g00016 251 PIRSF ILK 11 238 - -
Sebi204g00016 251 Pfam Protein tyrosine and serine/threonine kinase 5 222 IPR001245 GO:0004672|GO:0006468
Sebi204g00016 251 SUPERFAMILY Protein kinase-like (PK-like) 5 231 IPR011009 -
Sebi204g00016 251 ProSitePatterns Serine/Threonine protein kinases active-site signature. 67 79 IPR008271 GO:0004672|GO:0006468
Sebi204g00016 251 Gene3D Transferase(Phosphotransferase) domain 1 3 245 - -
Sebi204g00016 251 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 5 237 IPR044812 GO:0019199|GO:0045087
Sebi204g00016 251 FunFam PTI1-like tyrosine-protein kinase 3 23 237 - -
Sebi204g00016 251 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi204g00016 Sebi-Chr204 259500 261288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi204g00016 5 251 Receptor kinase-like Gene Family AT3G21630 72.065 9.67e-124 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sebi204g00016 PK_Tyr_Ser-Thr 2.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi204g00016 - K13429 gmx:100777781 473.781