Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi204g00015 ATGGAAAACCCCAGATGCGGGTTTCTCCTTGCTCTGCCATCGTTCCTCTTGTTACTGGCTTCATTCCCTTTCAGTGCAGAATCCAAGTGCACACAGGGTTGTCCACTAGCTCTAGCCTCCTACTACATATGGAAAGGTTCCAACCTCACATATATTTCAGAAATCATGCCATCTTCGCTTCTCACAAAGCCTGAAGACATAGTCAACTACAACAAAGCCACTATACCTAACAAAGACAGTGTTCAATCAGACCAAAGGGCCAACATTCCATTCCCATGTGACTGCATCAATGGCGAGTTCCTCGCTCACACGTTTAGTTACGATGTTCAGACAGGGGACACGTATGAAAAAGTTGCTGGGTACTACGCTAACCTCACCAATGTTCAATGGTTGATGAGGTTCAATAGCTACGGTCCCAATAGCATTCCAGACACTGGATCCCTTAATGTTACCGTTAACTGTTCTTGTGGGAACAGTGATGTTGATGATTATGGATTGTTCATCACTTACCCTCTTAGGCCTGGGGAGACTTTGGGGACTGTGGCAAATGAAATGAACCTTGATTCAGCCTTGCTGCAGAGGTACAATCCCGGTGTCAATTTCAACCAAGGGAGTGGCCTGGTTTTTATTCCGGGCAAAGATCAAAATGGTAGCTATGTGCTTTTGGTGTCCAGTTCAGGAGGTCTTGCTGGTGGAGCTATTGCTGGAATAGCTATTGGAGTAGTGGCTTGTCTTCTGTTATTGGCAGTTTGTATCTATTTTGGATATTTCCGGAAGAAGAAGATACAGAAGGAGGAATTCCTTGCACAAGATTCCAATGCTTTTTTAGCTCAAGATGGGAAGGATGAAACTTCTCGTAGTGCTGCAAATGAAACGCCGAGGCCTGGTGGTCCTGCTGTCATCACAGGCATAACAGTGGACAAATCGGTGGAATTCTCATATGAAGAGCTAGCAACTGCCACAGATAACTTTAGTATGGCTAATAAAATTGGTCAAGGTGGTTTTGGCTCTGTCTACTATGCGGAGTTGAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCTGAATTGAAAGTCCTGACACGTGTTCATCATCTTAACTTGGTAGGCTGGTACTAA 1143 0.4453 MENPRCGFLLALPSFLLLLASFPFSAESKCTQGCPLALASYYIWKGSNLTYISEIMPSSLLTKPEDIVNYNKATIPNKDSVQSDQRANIPFPCDCINGEFLAHTFSYDVQTGDTYEKVAGYYANLTNVQWLMRFNSYGPNSIPDTGSLNVTVNCSCGNSDVDDYGLFITYPLRPGETLGTVANEMNLDSALLQRYNPGVNFNQGSGLVFIPGKDQNGSYVLLVSSSGGLAGGAIAGIAIGVVACLLLLAVCIYFGYFRKKKIQKEEFLAQDSNAFLAQDGKDETSRSAANETPRPGGPAVITGITVDKSVEFSYEELATATDNFSMANKIGQGGFGSVYYAELRGEKAAIKKMDMQASKEFLAELKVLTRVHHLNLVGWY 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi204g00015 380 ProSiteProfiles Protein kinase domain profile. 324 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi204g00015 380 Gene3D Phosphorylase Kinase; domain 1 301 380 - -
Sebi204g00015 380 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Sebi204g00015 380 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 15 377 IPR044812 GO:0019199|GO:0045087
Sebi204g00015 380 Pfam Protein tyrosine and serine/threonine kinase 326 378 IPR001245 GO:0004672|GO:0006468
Sebi204g00015 380 SUPERFAMILY Protein kinase-like (PK-like) 304 380 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi204g00015 Sebi-Chr204 253795 257960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi204g00015 10 377 Receptor kinase-like Gene Family AT3G21630 50.396 1.50e-119 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi204g00015 PK_Tyr_Ser-Thr 1.8e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi204g00015 - K13429 gmx:100777781 530.791