Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi204g00008 ATGACTAACATAAGATTTCTGAAATTCTACTCTCAAAAGTGGAGTGACAAATGCCATATATACCTTCCTAACGGTCTTAAATCACTGTCAAACAAATTGAGGTACCTTCAATGGAATGGATACTATTTGGAGTCTTTGCCATCAACCTTTTGTCCTAAATTGCTTGTAAAACTTTCCATGCCTCACAGCAACCTTGGAAAACTTTGGGACGGAGTTCAGGATCTTGTGAATTTAAAGGAAATTAATCTTGATTTCTCCAAACACCTGGTTGAGCTTCCAGACTTATCTATGGCCACAAATCTTGATGCATTATCTCTTCGTCGATGTGAAAGTTTGCGTCAAGTTCATCCATCCATTTTGTCTCTCCATAAGCTTCAGTTTCTAGATTTAGAAGGTTGCACAGAGATTGAAAGCCTTCAAACTGATGTTCATTTGGAATCTCTTCGTTACCTCTCTCTCAAGAAATGCTCATCTATAAAGGAATTTTCAGTCTCATCAAAAGAGCTTTTTGCATTGTGGTTGGAGGGTACAGCTATAAAAAAATTACCTTCATCAATTTGGCAGAGTGAAAATCTTAACCAAATTCATTTGCGAGGATGTGACAATCTTGACAATTTGGGGAATAAGTTAACTCATGATCCAGGAGTAGGATCTCTCTCATGTCTAATTCTTTCTGAATGCAAACAACTGAATGCATCGAATCTATGTTTCATCCTTGATGGTTTGCAGTCTTTAACCAAGTTGTACCTGGACCATTGTTACAACTTACGATCACTCCCTGATAGCATTGGCTTGTTATCATCACTAGAGTACTTAAACCTATCAGGAAGTAATGTTGAGATCTTGTCTCCAAACATCAAAAACCTTTTGATGCTAAAAGAGCTTCGGTTAGACAATTGCAATAAACTTATGTCTCTGCCAAAGCTTCCACCATCCTTGAAAATGTTAGCTGCCTATAAATGCACACAACTAATTAATGCATCGAATATATGCCTTGATGGTCTGTGGTCATTAACATGGTTGGAGCTAGAAAATTGTTACAACTTACAAGAACTCCCTGACAACATTGGCTTGTTATCATCATTACAAATCTTAGACCTAAGAGGAACCAAGGTTGAGATCTTGTCTCCAAACATCAAGAACCTTTTGATGTTGGAAATGCTTAAGTTAGACAATTGCAAGAAACTTGTGTCTCTTCCTGAGCTTCCATCATCCTTGAGAATTTTAAGACTCTCTAATTGCACACAATTGAATGCATCAAATATATGCTTTGATGGCCTACAGTCTTTAACGTCACTGAATTTGAATAATTGTTGCAACTTAGGAGCACTTCCTGACAACATTGGCTTGCTGTCATCATTAGAGTACTTGAACCTATCAGGAAGCAATGTTGAGATCTTGCCTCCAAACATCAAGAACCTTTTGATGCTGAAAGAGCTTTGTCACTGCCAAATGGCAAATATAAATCTGTTGAATGTTCTATCAGCATATATTCCAAAAGCATTGGGTGGAGAATGGTCAAGGAAAGGGATGATAAAGGGGTGTGGGGTTCACCCTGTATATGCCACTGAACATGGTTGTTCCTCTAAACAACATGATTTGAAGTTGGAGTTTAAGGGTAGTTCTAAAGATTTTGTTGAGATAGAATCCAGCAGTTCTAAAGACATCAATAAGTTACAACCCAGAGCATTTGGATTTGTAATTGAAGGATCTAATGAGACTAAGAATTCGCAGGAAGTCACACACCAAATAATTACAACAGGAATGCAGAATGAAAATTCTCTGTATCACAACTTCATAGCTTCAAAAAGCTCAAAAGTTCAAGAAGGAGGAGAAAAAGAAGACTTGGAAAGTGAAGCTGAACAAAACAAATCAAAGAAAAGAAAATTGAAGACTTTAAAAACTAACCTAGCACTACCCACTTCTTCAAAAACTCTGAAGAAGAGAAATAAGAAAATAAAAACTAAGGAATCTCAACCCAGCCATTCTGAGGAAAATGAAGAAGCTGTTAACACCATTGATCAGGGAGAATCTACACCACTGATAGAACCCCCATTGACAAATTCTGCTTATCCTGTTCCAAGTCATGATCAAATTAAACAAGAAAAACTAAAGGAACAAGCCACAAGCAGTGGATCTGGATCCTCTCTTTTTCATCAACTTAATATTTCAAATAAATCTCTTCCTAAATATAGCCCAATGGATCTTGACGAGTGCCTTCAAACTTTGGATGAAAATCCATTTGCTATTCTCAATATGCTCTCTGGGGATCTTTCCTTCAATTCGGCTCAATCAGAATCAATCATTCTAAAGGAACAATCAGAAGAACCCATCCAAAAGCTTCTTGAAAACTTCAGAGAACTAGTCTTCACAAATCCTTTGATGGAACTTCTTCCAAAAGACCTTAAATTTCAAGAAATCATATCAGCATACATTAAAACTTTTGGTACTCGACATGGAGAACTTTCTGTTGAACAAGTTCGAGGGCTTGATCATTTCATCCAATTTTACAACCAAGTCATTGATATCTTGAAGCAATGTCAAAACACTGATGGAGAATTAACTCAGGCCAATTTAGAGACAACTGATTTGTGTGACAAGTTAAAAGATTTGAAGACCAAGGTAGTGAAGTTTGATGAAATGGTTAAGTCCAACTATCAGAGAATTTGTGAAATTGAAAAGAGGAAGAAGGAAATTGAAGACCAAATCAGGAAACTGAGGAAGGAGGAAGAGGATTTACAAGTAGAAAAATCTTTTCTCGAATCAACTAATTTGAAGAAGGAAAAAAAGAAGGAAGAAATGATCAATTTTGCCAAATCTATTTCAATAGATGCAGTGAAGGCCACAAAAAGGATAGTGGATCTTGAGAAAGCAAAGCACCATTTGAATGACATATATGCAAATTTTGAGAAATGTTTTGATCAAATGAGATCGAATCCTCCCTTTTAG 2949 0.3652 MTNIRFLKFYSQKWSDKCHIYLPNGLKSLSNKLRYLQWNGYYLESLPSTFCPKLLVKLSMPHSNLGKLWDGVQDLVNLKEINLDFSKHLVELPDLSMATNLDALSLRRCESLRQVHPSILSLHKLQFLDLEGCTEIESLQTDVHLESLRYLSLKKCSSIKEFSVSSKELFALWLEGTAIKKLPSSIWQSENLNQIHLRGCDNLDNLGNKLTHDPGVGSLSCLILSECKQLNASNLCFILDGLQSLTKLYLDHCYNLRSLPDSIGLLSSLEYLNLSGSNVEILSPNIKNLLMLKELRLDNCNKLMSLPKLPPSLKMLAAYKCTQLINASNICLDGLWSLTWLELENCYNLQELPDNIGLLSSLQILDLRGTKVEILSPNIKNLLMLEMLKLDNCKKLVSLPELPSSLRILRLSNCTQLNASNICFDGLQSLTSLNLNNCCNLGALPDNIGLLSSLEYLNLSGSNVEILPPNIKNLLMLKELCHCQMANINLLNVLSAYIPKALGGEWSRKGMIKGCGVHPVYATEHGCSSKQHDLKLEFKGSSKDFVEIESSSSKDINKLQPRAFGFVIEGSNETKNSQEVTHQIITTGMQNENSLYHNFIASKSSKVQEGGEKEDLESEAEQNKSKKRKLKTLKTNLALPTSSKTLKKRNKKIKTKESQPSHSEENEEAVNTIDQGESTPLIEPPLTNSAYPVPSHDQIKQEKLKEQATSSGSGSSLFHQLNISNKSLPKYSPMDLDECLQTLDENPFAILNMLSGDLSFNSAQSESIILKEQSEEPIQKLLENFRELVFTNPLMELLPKDLKFQEIISAYIKTFGTRHGELSVEQVRGLDHFIQFYNQVIDILKQCQNTDGELTQANLETTDLCDKLKDLKTKVVKFDEMVKSNYQRICEIEKRKKEIEDQIRKLRKEEEDLQVEKSFLESTNLKKEKKKEEMINFAKSISIDAVKATKRIVDLEKAKHHLNDIYANFEKCFDQMRSNPPF 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi204g00008 982 Gene3D Ribonuclease Inhibitor 169 326 IPR032675 -
Sebi204g00008 982 Gene3D Ribonuclease Inhibitor 1 168 IPR032675 -
Sebi204g00008 982 Gene3D Ribonuclease Inhibitor 327 504 IPR032675 -
Sebi204g00008 982 MobiDBLite consensus disorder prediction 606 716 - -
Sebi204g00008 982 MobiDBLite consensus disorder prediction 672 695 - -
Sebi204g00008 982 SUPERFAMILY L domain-like 218 483 - -
Sebi204g00008 982 SMART LRR_typ_2 359 381 IPR003591 -
Sebi204g00008 982 SMART LRR_typ_2 451 473 IPR003591 -
Sebi204g00008 982 SMART LRR_typ_2 242 265 IPR003591 -
Sebi204g00008 982 SMART LRR_typ_2 266 288 IPR003591 -
Sebi204g00008 982 Coils Coil 613 636 - -
Sebi204g00008 982 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 208 308 - -
Sebi204g00008 982 Coils Coil 889 923 - -
Sebi204g00008 982 Pfam Leucine Rich Repeat 55 73 IPR011713 -
Sebi204g00008 982 SUPERFAMILY L domain-like 2 310 - -
Sebi204g00008 982 MobiDBLite consensus disorder prediction 607 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi204g00008 Sebi-Chr204 150059 154982 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi204g00008 184 480 WRKY Transcription Factor Family AT4G12020 27.273 1.21e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi204g00008 - - gsj:114380057 414.846