Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi204g00003 ATGAAGAAGTTTACTCTTTATGCTTGTTTACTCAACTTGAGTCTTTTGGTTATTTTTCCCTGTAGCAAAGCCAGTCAGGCTGATAAACTTGATGAGTTGATTCTATCTAGGAGCTCACACAATCCCCCTGTGACACTTTCTTGGGAAGAGGAAGATGCATTGAAAACACATTCCTCTGCTTATGTTGCACCCCAAGAGGGGCTAATGCTAGCTGACAAGATTGTGGCATTGCCTGGCCAGCCCTATGGGGTGAATTTTGATCAGTATTCAGGCTATGTCACAGTTGATCAAGAGGCTGGAAGAGCACTTTTCTATTATTTTGTGGAGTCTCCATATTACTCTTCAACTAAACCTTTAGTATTGTGGCTCAATGGAGGACCTGGTTGTTCCTCCCTGGGGTATGGGGCCTTTGAAGAGCTAGGACCCTTCAGAGTCAACCCTGATGGCAAAACTCTATTCCGTAACAAATATGCTTGGAATGAAGTGGCAAATGTGCTATTCTTGGAATCCCCTGCTGGAGTGGGCTTTTCCTACTCAAACACTACTTCTGACTATGACAGTGCAGGAGATAAAGCTACTGCTAAGGATGCCTATGTCTTCCTTATTAACTGGCTAGAGAGGTTTCCACAGTACAAAAACAGGGATTTTTACATAACTGGAGAGAGCTATGCTGGTCATTATGTGCCTCAGCTTGCATACACTATTCTTCTGAACAATAAATACCAACAACAAACCATTATTAACCTCAAAGGCATTGCTATAGGGAATGCTTGGATTGATGATGTTACAGGTTCAAAGGGGATAGTTGATTACTTATGGACACATGCTTTGAACTCAGATCAAACCCATGAGTTGATTGAGAAGTATTGCGACTTAACTTCTGAAAATCCTTCAAGAATATGTAACATTGCAACACGAAGGGCCTTAATTGAGAAAGGAAACATAGACTTCTATAACATCTATGCTCCACTATGTCATGATCCTTCTCTCAAAAATGGATCAACTGGTTCTGTAGATGATTTTGACCCATGTTCTGATTCCTACGGTTTTGCCTATCTAAATAGGCCAGAGGTCCAAATGGCTCTTCATGCAAAACCCACAAATTGGAGCTATTGCAGAGGTTTTGACTGGAAAGACAGCCCAACTACCATCCTACCAGTCATCAAGTATCTCATTGCCAAGGATGTGTTCTCCTACAGTGGTGATACAGATGCAAGGGTGCCAGTCACATCTTCCAGATATGCAATCAACAAACTCAAGCTCCCAATCCAGGAAGCTTGGCGTCCATGGTATTCTGGAAGTGAGGTTGGAGGATATGTGGTGGGATACAAAGGATTGAAACTGGTTACAGTAAGAGGAGCAGGACATCTGGTTCCAAGCTGGCAACCAGAACGGGCTCTGACCATGATCTCCTCATTCCTCTTTGAAAGCATTGCTCCACCTAGTCCTCCTCCATCGTAG 1461 0.4305 MKKFTLYACLLNLSLLVIFPCSKASQADKLDELILSRSSHNPPVTLSWEEEDALKTHSSAYVAPQEGLMLADKIVALPGQPYGVNFDQYSGYVTVDQEAGRALFYYFVESPYYSSTKPLVLWLNGGPGCSSLGYGAFEELGPFRVNPDGKTLFRNKYAWNEVANVLFLESPAGVGFSYSNTTSDYDSAGDKATAKDAYVFLINWLERFPQYKNRDFYITGESYAGHYVPQLAYTILLNNKYQQQTIINLKGIAIGNAWIDDVTGSKGIVDYLWTHALNSDQTHELIEKYCDLTSENPSRICNIATRRALIEKGNIDFYNIYAPLCHDPSLKNGSTGSVDDFDPCSDSYGFAYLNRPEVQMALHAKPTNWSYCRGFDWKDSPTTILPVIKYLIAKDVFSYSGDTDARVPVTSSRYAINKLKLPIQEAWRPWYSGSEVGGYVVGYKGLKLVTVRGAGHLVPSWQPERALTMISSFLFESIAPPSPPPS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi204g00003 486 FunFam Carboxypeptidase 384 476 - -
Sebi204g00003 486 FunFam Carboxypeptidase 69 327 - -
Sebi204g00003 486 Pfam Serine carboxypeptidase 78 475 IPR001563 GO:0004185|GO:0006508
Sebi204g00003 486 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Sebi204g00003 486 SUPERFAMILY alpha/beta-Hydrolases 75 475 IPR029058 -
Sebi204g00003 486 Gene3D - 384 475 - -
Sebi204g00003 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Sebi204g00003 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Sebi204g00003 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Sebi204g00003 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Sebi204g00003 486 Gene3D - 344 375 - -
Sebi204g00003 486 Gene3D alpha/beta hydrolase 69 327 IPR029058 -
Sebi204g00003 486 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 74 463 IPR001563 GO:0004185|GO:0006508
Sebi204g00003 486 ProSitePatterns Serine carboxypeptidases, histidine active site. 446 463 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi204g00003 Sebi-Chr204 61258 64430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi204g00003 399 474 Calmodulin-binding Proteins AT2G22960 31.169 3.95e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi204g00003 K16297 - gmx:100779407 811.216