Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi203g00082 ATGGCAAAGAAAACACACTACAACATCTTCTCCAATCAGCAGTATATTGGTCATGAAGCAGCAGCTATGGACATGCACCACAACAACCATCCCCAAAATAGTCACACATCCACAAGCCATACTTCAGACTCCAGTGAGCCTTGTGAGAATGGTAAATGGGCTTCCAAGCTTCTTAGAGAGTGTGCCAGAGCAATCTCTGATAGGGACTCTGCCAAAATTCACCATCTTTTATGGATGTTAAATGAGCTTGCTTCCCCCTATGGAGACTGTGAACAAAAATTAGCCTCCTACTTCTTGCAAGCTCTGTTTTGTAAGGCCACATGCTCTGGCCAAAGGTCCTACAAGACCCTAACCTCAGTGGCTGAGAAAAGCCACTCCTTTGATGCAGCTAGAAAGTTAATACTCAAGTTTCAAGAGGTTAGTCCTTGGACAACTTTTGGACATGTGGCTTCAAATGGTGCCATTTTGGAAGCCTTAGAAGGGGAGACTAAACTCATCCACATAATTGATCTAAGCAACACCCTTTGCACTCAGTGGCCTACTCTGCTGGAAGCCTTGGCTACAAGAAATGATATTGAAACCCCTCACTTGAAGCTCACTGTTGTTGCTTTAACTGGTAGCATAGTAGGATCTGTTATGAAGCAAGTTGGTCAAAGAATGGAGAAGTTTGCTAGGCTTATGGGGGTGCCCTTTGAGTTTAATGCAATATATGGGGTAGATCATCTAGGGGGGCTAACAAAAGAAAGGTTGGGAGTTCAAGAGGGGGAGAGTATTGTTGTGAATTGTGTTGGGACACTGAGAAGAGTGAAAGAGGAAAAGAGGGGAACAGTGATTGGCATGTTGAAATCACTTAATCCTAGAGTTGTGACAGTTGTTGAGGAGGAAGCTGACTTTTGTAGCTCAAAAAATGACTTTGTCAAAAGCTTTGAAGAGTGTCTAAGGTTTTACACACTTTACTTTGAGATGTTAGAGGAGAGCTTCCCCCCAATAAGTAATGAGCAATTGATGCTAGAGAGGGAGTGCTCAAAAAGCATACTTGGGGTTTTAGCTTGTAGTGGTGATGAATTAGTAGGAGATCATGATGGTGAGAGAAGGGAGAGAGGGATCCAGTGGAGTAGGAGGCTTAAAGAGGAGGCATTTTCTCCAGTTGGGTTCAGTGATGATGTTGTGGATGATGTGAAGGCATTGCTTAAGAGGTACCATACAGGGTGGTCACTTGTGGTGCCGCAAGGAGATGATTATCTCTCAGGACTTTACTTGACATGGAAGGAGGAACCTGTAGTTTGGGCATCAGCATGGAAACCGTAA 1308 0.4396 MAKKTHYNIFSNQQYIGHEAAAMDMHHNNHPQNSHTSTSHTSDSSEPCENGKWASKLLRECARAISDRDSAKIHHLLWMLNELASPYGDCEQKLASYFLQALFCKATCSGQRSYKTLTSVAEKSHSFDAARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLIHIIDLSNTLCTQWPTLLEALATRNDIETPHLKLTVVALTGSIVGSVMKQVGQRMEKFARLMGVPFEFNAIYGVDHLGGLTKERLGVQEGESIVVNCVGTLRRVKEEKRGTVIGMLKSLNPRVVTVVEEEADFCSSKNDFVKSFEECLRFYTLYFEMLEESFPPISNEQLMLERECSKSILGVLACSGDELVGDHDGERRERGIQWSRRLKEEAFSPVGFSDDVVDDVKALLKRYHTGWSLVVPQGDDYLSGLYLTWKEEPVVWASAWKP 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi203g00082 435 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 53 424 IPR005202 -
Sebi203g00082 435 ProSiteProfiles GRAS family profile. 45 434 IPR005202 -
Sebi203g00082 435 MobiDBLite consensus disorder prediction 27 48 - -
Sebi203g00082 435 Pfam GRAS domain family 56 434 IPR005202 -
Sebi203g00082 435 MobiDBLite consensus disorder prediction 26 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi203g00082 Sebi-Chr203 1276663 1277970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi203g00082 27 435 GRAS Transcription Factor Family AT4G37650 51.294 1.29e-143 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi203g00082 GRAS 4.3e-94 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi203g00082 - - csin:114310015 622.083