Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sebi203g00067 | ATGGCTTCTTCGATGCTTCTTCCCCTTTGTTCTACTTGTGGTAAAACTCCGTCTTTTACTCCTCCTAGAGGCATTTCTGTTGACAAACTTCGAAGATTAGTTCTTAATGTCAAGTCCTCAGAGAAAACGGAATATACTGCTATGTTTAATACCAATTCACGCAGAGACTTTCTTGGGTTAGCTTTAGGAGTCTCAGGCCTCTTCATCCATTCATTGGATGCAGCCTATGGAGCTGGTTTGCCCCCCGAGGAAAAGCCAAAATTATGTGATGACACTTGTGAGAAAGAGCTTGAAAATGTACCTATGGTAACTACTGAATCAGGTTTGCAATACAAGGATATTAAGGTTGGACAAGGCCCTAGTCCACCAGTTGGATTTCAGGTCGCCGCTAATTATGTTGCAATGGTTCCATCTGGACAAATATTTGATAGTTCATTGGAGAAAGGTCAGCTTTACATTTTTCGAGTTGGTTCTGGTCAGGTGATAAAAGGTCTTGATGAAGGTATTCTGAGCATGAAAGTAGGAGGGAAGCGTCGACTATATATTCCTGGATCATTAGCATTCCCAAAAGGCCTCACTTCTGCTCCAGGAAGACCAAGGGTGGCTCCAAGCAGTCCAGTCGTATTTGATGTTAGTTTGGAATATATACCCGGGCTTGAATTGGAAGATGAATAA | 675 | 0.4237 | MASSMLLPLCSTCGKTPSFTPPRGISVDKLRRLVLNVKSSEKTEYTAMFNTNSRRDFLGLALGVSGLFIHSLDAAYGAGLPPEEKPKLCDDTCEKELENVPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGQLYIFRVGSGQVIKGLDEGILSMKVGGKRRLYIPGSLAFPKGLTSAPGRPRVAPSSPVVFDVSLEYIPGLELEDE | 224 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sebi203g00067 | 224 | Gene3D | - | 97 | 215 | IPR046357 | GO:0003755 | |
| Sebi203g00067 | 224 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 125 | 213 | IPR001179 | GO:0003755 | |
| Sebi203g00067 | 224 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 125 | 217 | IPR001179 | GO:0003755 | |
| Sebi203g00067 | 224 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 75 | 217 | - | - | |
| Sebi203g00067 | 224 | SUPERFAMILY | FKBP-like | 39 | 213 | - | - | |
| Sebi203g00067 | 224 | FunFam | Peptidylprolyl isomerase | 97 | 215 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sebi203g00067 | Sebi-Chr203 | 1052234 | 1055562 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sebi203g00067 | 106 | 213 | Calmodulin-binding Proteins | AT3G25230 | 36.697 | 1.67e-12 | 64.3 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sebi203g00067 | K01802 | - | gmx:100818743 | 384.8 |