Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi202g00037 ATGGATTACTTTGATGTGGGATTCAATGTGATTAATGGTTCATTTCCTTCTAGTTTGAGGAGCTGGACAGGGCTAACCACTTTAATCTTAGAAGAGAATCATTTTATTGGGGGTATCCCTGATTTCTTGTCAGAATTCAACAATCTTCTTGAGTTAAAAATTGGTGGAAATTTGTTCAAAGGTGAAATTCCTAAATCAATAGGAGCATTGCATAATCTGATATATGGGTTGAATTTGAGTGCTAATGGATTGACTGGTGAGATTCCTTTAGAAATTGGGAAGCTAATAAAGCTGCAAAGCCTGGATGTATCATTGAACAATTTGACCGGAAGCATAGATGTTCTTGGTGAGCTTCTTTCGTTAATAGAGGTTAATATTTCCTACAACAACTTCAATGGTTCTGTACCCAAAAATCTGATGAAGTTACTGAACTCCTCACCATCTTCTTTCTTGGGTAATTCTCACATATGTATCAATTGTTCACCTTTAGATGGCTTGAATTGCACTAAAGCTAGCCATTTGGAGCCATGTTCCAATGAATTTATTGATCACAATCACAAAAGAATCAGTAAACTTGTAATTGTGATGATAGAAGTTGGATCCTCAATGTTTGTTTCTGCCATGCTGGTAGTATTAGTTCACATGAATCTCCAAAAAAGATATAAGCAGGAAGTGAATGCTTCAGTTGAAGGGGAAGGACCATTGGCATCATCTTTTATTATTATTGGTAGAGGAGCCAACCAACATATTGGGCAAATAAATAAGCAAGAAGTTATGATCCGCACTGAAAAGCATTTATCTTCCCTTGTTAAGCAAGTGATGAAGGTGACTAACAACCTAAATGATCAGCATATTGTTGGCAGAGGAGCCCATGGAATTGTTTACAAAGTCCAACTAGGTCCAGACCAAGCACTTGCTGCAAAGAAGATTTCATTTTCAACCAACAGAGGGAAGAGCAAACATAAGCTCAAAGAAACTATGGTGAGGGAAGTTCAAATTTCTGGGATGATTGATCATCCAAATTTGGCCTCATACACAGACTATTGGTTTGGGAAGGACTATGGTGTAATCTTGTACAAGTACATGGAAAATGGAAGCCTGCATGATGTTTTACATGATGAAAGGAATCCACCACCATCCTTAAAATGGAATGTCCGGCTTAATATAGCCATTGGAGCTGCAAATGGACTAGCATATCTACATTATAACTGTCGACCTCCCATAGTACATAGAGACATCAAACCAAAAAATATACTCCTTGACCATAATCTGGAGCCTGTTATCACTGATTTTGGTACTTCCCTGCGAAGGAGATGGCATGAGCACTCTATTTTTCCTGAAAATAGGCAAAGGCTTTCAGCATATATTGCTGGTACCATTGGCTATATTGCACCAGAGAATGCATATGCAATAGTGGTGAGCAGAAAGTCTGATGTTTACAGCTATGGAGTAGTTTTGCTTGAACTAATAACCAGAAAGAAAGTATTAGATCAGTCATTTATGGAGGAGGGAACAAGTTTAGTAAGATGGATTAGATCTGTCTACACAGAACCACAAAAAATTGGAGAGATTGTTGATTCAAGTCTTGCAGGTGAATTTTCCCAATCAATAATAATAATGAAGCAAGTTAGTGCAGTGCTTGACTTGGCTTTGAGATGTACTCAGAGGGATCCAAGAAAGAGGCCCACAATAAGGAAAGTTGTTAGGTTCTTTCAGAACCCCATTTTTCTAAAGCAGAGGCATGAGTATGATGATGAAGCACCACATCCACAGGCACAAGTAGAACCAAGTAAAATAAGTGACTCTTACTCCACCAATCCAACTAATAGTATTAGTAATAGCAAAGTGGCTTCAAAGGAAGAGGTTTCTAACTTTTGGCAAACTACAAACTCACTTGAGGTAAAAAACAACCAACACAAGTCCCACATTGCTTGGAGGTTTCCACCAGAGGGATGGGTTAAAGTTAACATTCATAGCAATGCAACAGGAGGAATATGTGGAGGAATCATGCGTGGGGATAGTGGGGAATGGCTACAAGGTTTTACAGTGCGTTTTGCAGCATATAATGAGTCTGATGATGTTGTTGCTGGAATATGGGGAATATACCATGGAATGAAAATGGCTTGGGAATTTGGGTTTCCAAGAGTTATCATAGAGACAGATAATTTGACAGCAGTGCAACTACTCTTATATGTACCAACTAACAAGAAAGATTGGGAGGTCAAGGTACAATACATTTTCAGAGAAGGCAACTTGTGTGCTAATTGGCTGGTCAATAGTGTTGATTATTGGGGTGAGGATGTTATTTTAAAAACCCCACCTAAGGAACTTGTTGATATTCTTAATCAGGATGTTTTTGATGCATCAACACCGATGGCTTAG 2382 0.3846 MDYFDVGFNVINGSFPSSLRSWTGLTTLILEENHFIGGIPDFLSEFNNLLELKIGGNLFKGEIPKSIGALHNLIYGLNLSANGLTGEIPLEIGKLIKLQSLDVSLNNLTGSIDVLGELLSLIEVNISYNNFNGSVPKNLMKLLNSSPSSFLGNSHICINCSPLDGLNCTKASHLEPCSNEFIDHNHKRISKLVIVMIEVGSSMFVSAMLVVLVHMNLQKRYKQEVNASVEGEGPLASSFIIIGRGANQHIGQINKQEVMIRTEKHLSSLVKQVMKVTNNLNDQHIVGRGAHGIVYKVQLGPDQALAAKKISFSTNRGKSKHKLKETMVREVQISGMIDHPNLASYTDYWFGKDYGVILYKYMENGSLHDVLHDERNPPPSLKWNVRLNIAIGAANGLAYLHYNCRPPIVHRDIKPKNILLDHNLEPVITDFGTSLRRRWHEHSIFPENRQRLSAYIAGTIGYIAPENAYAIVVSRKSDVYSYGVVLLELITRKKVLDQSFMEEGTSLVRWIRSVYTEPQKIGEIVDSSLAGEFSQSIIIMKQVSAVLDLALRCTQRDPRKRPTIRKVVRFFQNPIFLKQRHEYDDEAPHPQAQVEPSKISDSYSTNPTNSISNSKVASKEEVSNFWQTTNSLEVKNNQHKSHIAWRFPPEGWVKVNIHSNATGGICGGIMRGDSGEWLQGFTVRFAAYNESDDVVAGIWGIYHGMKMAWEFGFPRVIIETDNLTAVQLLLYVPTNKKDWEVKVQYIFREGNLCANWLVNSVDYWGEDVILKTPPKELVDILNQDVFDASTPMA 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi202g00037 793 SUPERFAMILY Protein kinase-like (PK-like) 259 570 IPR011009 -
Sebi202g00037 793 Gene3D Phosphorylase Kinase; domain 1 242 361 - -
Sebi202g00037 793 Gene3D Ribonuclease Inhibitor 1 175 IPR032675 -
Sebi202g00037 793 MobiDBLite consensus disorder prediction 595 616 - -
Sebi202g00037 793 CDD RNase_H_like 666 759 IPR044730 -
Sebi202g00037 793 Pfam Protein kinase domain 282 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi202g00037 793 ProSitePatterns Protein kinases ATP-binding region signature. 286 309 IPR017441 GO:0005524
Sebi202g00037 793 SUPERFAMILY L domain-like 5 145 - -
Sebi202g00037 793 Pfam Reverse transcriptase-like 658 729 IPR002156 GO:0003676|GO:0004523
Sebi202g00037 793 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 362 579 - -
Sebi202g00037 793 MobiDBLite consensus disorder prediction 582 616 - -
Sebi202g00037 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 408 420 IPR008271 GO:0004672|GO:0006468
Sebi202g00037 793 ProSiteProfiles Protein kinase domain profile. 280 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi202g00037 793 PANTHER LEUCINE RICH REPEAT KINASE 2 6 579 - -
Sebi202g00037 793 Gene3D Transferase(Phosphotransferase) domain 1 362 586 - -
Sebi202g00037 793 SMART serkin_6 280 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi202g00037 Sebi-Chr202 733167 736125 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi202g00037 1 584 Receptor kinase-like Gene Family AT1G73080 43.412 1.71e-135 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sebi202g00037 Pkinase 3.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi202g00037 - - adu:107496784 612.838