Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi202g00034 ATGGCGAGTTCTTCTTCCTCGAGAAAAATGAACAAGGATGAGCAAGTGGCCCAATCTGAAGACCACATGCCAAGTTGGATTGAGGCATTTCTGGAAAATACTTTCTTTAACAAATGTCCTTCTCATCCAATTCGTAGGAATGAGTTAAATAAATACTGTATTAACTGCGATATGTCAGCTTGCCAATATTGTGTATCATCAGGTTCTCATCGCCATCACCAGATGCTTAAAATTTATAGACATGTTTACAAAGATGTTGTCTCCCTTTCTGCTATGGAAAAGTATGTTGATTGCTCGTATATCCAGCCCTACAAGTGCAACAAGCAACTGGTTATTTCTCTGAATCCTCTCCCCCATTGTGGTTCAACATTAAATAATGAGGCATCATGCAACATCTGCAATAGAAAGTTGACTGAACCTAATTTATATCGCTACTGCTCTATTTCTTGTAAGGTCAGAGCTGTTTCAAGAGAGCCTGATGATTCAGTTCCTTCTTCCATTTCCATCCAGAGTCCTCCTCCTCCTCCCGTGGAAAATCAGGAGGAAACTTCTGAACCCCCGAAAAGGAAAAGGAGTAGAAAGGGAACACCCCACAGAGCTCCCTTCTTCTAA 612 0.4118 MASSSSSRKMNKDEQVAQSEDHMPSWIEAFLENTFFNKCPSHPIRRNELNKYCINCDMSACQYCVSSGSHRHHQMLKIYRHVYKDVVSLSAMEKYVDCSYIQPYKCNKQLVISLNPLPHCGSTLNNEASCNICNRKLTEPNLYRYCSISCKVRAVSREPDDSVPSSISIQSPPPPPVENQEETSEPPKRKRSRKGTPHRAPFF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi202g00034 203 ProSiteProfiles Zinc finger B-box type profile. 39 78 IPR000315 GO:0008270
Sebi202g00034 203 Gene3D Classic Zinc Finger 32 97 - -
Sebi202g00034 203 MobiDBLite consensus disorder prediction 1 20 - -
Sebi202g00034 203 Pfam B-box zinc finger 37 78 IPR000315 GO:0008270
Sebi202g00034 203 SUPERFAMILY B-box zinc-binding domain 36 81 - -
Sebi202g00034 203 MobiDBLite consensus disorder prediction 157 203 - -
Sebi202g00034 203 CDD Bbox2 38 78 - -
Sebi202g00034 203 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 17 202 - -
Sebi202g00034 203 Pfam PLATZ transcription factor 80 152 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi202g00034 Sebi-Chr202 707135 710235 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Sebi202g00034 PLATZ 2.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi202g00034 - - qsa:O6P43_014262 266.159