Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi202g00008 ATGATAGCTCATCTTTTCAATGCACCACTTGAAGAGTCAGAACCTGCAGTTGGTGTTGGCACTGTTGGCTCATCAGAGGCCATAATGTTGGCTGGATTGGCATTCAAGAGGAAGTGGCAGAACAAAAGGAGAAGTGAAGGGAAGCCTATTGACAATCCCAACATTGTCACTGGTGCAAATTTCAGCACTAATGTTAATAATGAGTCATTAATGGGGTTTAATTATGCTCATGTGAAGGTTTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGTTGAAAGAGGTAAAGCTTAGTGAAGGATACTATGTAATGGACCCTGAAAAAGCTGTGGAAATGGTGGATGAGAACACCATTTGTGTTGCTATCCTTGGTTCCACACTAAATGGAGAGTTTGAAGATGTCAGGCGCTTAAATGATCTCCTAGAGGAAAAGAATAAGGAAACAGGATGGGACACTCCAATTCATGTGGATGCAGCCAGTGGTGGATTCATTGCACCATTTCTTTATCCAGAGCTTGAGTGGGACTTCCGGTTACCACTAGTGAAGAGCATCAATGTTAGTGGACACAAATATGGTTTAGTGTATGCTGGAATTGGTTGGGTCATTTGGAGAAGCAAGGAAGACCTTCCTGAGGAACTCATCTTCCACATTAACTATCTTGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCTAGCCAAGTTATTGCTCAGTACTACCAACTAATTCGTCTGGGTTACGAGGGATATAGAAATGTGATGGAAAACTGTAAAGACAACATGGTTGTACTTAAGGAAGGACTTGAGAAAACAGGTCGCTTTGACATTGTATCCAAAGATGAAGTACCAGCATACACAATGCCCCCAGATGCACAACATGTGACAGTGCTCCGTGTTGTGATCAGAGAGGACTTTTCACGCACCTTTGCAGAGCGTCTTGTTAATGATATTACCAAAGTGTTACATGAGCTTGATTTGCTTCCTGCAAAGATACTCAATAGCAATGCCGTAACTATTACTGGAGAAGAAGGTGAAAAAATTGGTGGCGAAGTGATTGTTAAGAAGAGTGCTTTGGAGACCCAAAGGGAAATCACTGCAGCTTGGAAGAAATTTGTGATGGACAAGAAGAAGATGAATGGTGTTTGTTAG 1161 0.4238 MIAHLFNAPLEESEPAVGVGTVGSSEAIMLAGLAFKRKWQNKRRSEGKPIDNPNIVTGANFSTNVNNESLMGFNYAHVKVCWEKFARYFEVELKEVKLSEGYYVMDPEKAVEMVDENTICVAILGSTLNGEFEDVRRLNDLLEEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCKDNMVVLKEGLEKTGRFDIVSKDEVPAYTMPPDAQHVTVLRVVIREDFSRTFAERLVNDITKVLHELDLLPAKILNSNAVTITGEEGEKIGGEVIVKKSALETQREITAAWKKFVMDKKKMNGVC 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi202g00008 386 PANTHER GLUTAMATE DECARBOXYLASE 286 386 IPR010107 GO:0004351|GO:0006536|GO:0030170
Sebi202g00008 386 NCBIfam glutamate decarboxylase 1 284 IPR010107 GO:0004351|GO:0006536|GO:0030170
Sebi202g00008 386 Pfam Pyridoxal-dependent decarboxylase conserved domain 1 287 IPR002129 GO:0016830|GO:0019752|GO:0030170
Sebi202g00008 386 SUPERFAMILY PLP-dependent transferases 1 328 IPR015424 -
Sebi202g00008 386 Coils Coil 128 148 - -
Sebi202g00008 386 Gene3D - 1 274 IPR015421 GO:0003824
Sebi202g00008 386 Gene3D - 283 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi202g00008 Sebi-Chr202 69434 71522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi202g00008 1 386 Calmodulin-binding Proteins AT5G17330 73.141 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi202g00008 K01580 - ming:122080246 620.542