Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi201g00064 ATGAAGCTTTTAGTACAATTGTTTGAGGAGTGCTTCAATTGGAAAAAGGGTAGAGAAATTTTGTTACTTTATGGGGAACAAGACCTGTTTGAAAGAGGGAAAGTGATTGATAATTTTGAGGATCCATGTGGAGTTTCAAAGGTACTCCTTGCTTCAATTACAGCTTGTGCTGAAGGTATTAGTCTTACTACAGCTTCTCGGTTGATATTTTTGGACTCGGAGTGGAATCCATCGAAGATAAAGCAGGCTATTGCAAGGGCTTTTCGTCCTGGCCAGGAAAAGATGGTTTATGTGTATCAACTCTTGGCAAAAGGCTCAATGGAGGAAGATAAGTACCCGCAGAAACCACTTGGAAAGAGTGGGTTTCCAACATGA 375 0.408 MKLLVQLFEECFNWKKGREILLLYGEQDLFERGKVIDNFEDPCGVSKVLLASITACAEGISLTTASRLIFLDSEWNPSKIKQAIARAFRPGQEKMVYVYQLLAKGSMEEDKYPQKPLGKSGFPT 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi201g00064 124 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 124 IPR001650 -
Sebi201g00064 124 Gene3D - 1 115 IPR027417 -
Sebi201g00064 124 SMART helicmild6 2 91 IPR001650 -
Sebi201g00064 124 CDD SF2_C_SNF 15 102 - -
Sebi201g00064 124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 112 IPR027417 -
Sebi201g00064 124 Pfam Helicase conserved C-terminal domain 10 90 IPR001650 -
Sebi201g00064 124 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 1 114 IPR044567 GO:0080188
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi201g00064 Sebi-Chr201 1489511 1489885 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi201g00064 17 109 RAD5 or RAD16-like Gene Family AT5G05130 40.426 2.00e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi201g00064 K10875 - gmx:100781856 181.03