Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi201g00061 ATGTGGAGTTTCAAAGCTTCTCGGTTGATATTTTTGGACTCGGAGTGGAATCCATCGAAGATAAAGCAGGCTATTGCAAGGGCTTTTCGTCCTGGCCAGGAAAAGATGGTTTATGTGTATCAACTCTTGGCAAAAGGCTCAATGGAGGAAGATAAGTACCGCAGAACCACTTGGAAAGAGTGGGTTTCCAACATGATTTTTAGTGAGGATTTTTCGGAGAACCCTTCCCAGTGGAAAGCAGAGAAGATTGAAGATGATATACTAAGGGAAATGGTTGAGAATGACAATCCTAAAGCAATCCATATGATCATGAAGAATGAAAAAGCTTCAACAAACTGA 339 0.41 MWSFKASRLIFLDSEWNPSKIKQAIARAFRPGQEKMVYVYQLLAKGSMEEDKYRRTTWKEWVSNMIFSEDFSENPSQWKAEKIEDDILREMVENDNPKAIHMIMKNEKASTN 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi201g00061 112 Gene3D - 4 108 IPR027417 -
Sebi201g00061 112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 95 IPR027417 -
Sebi201g00061 112 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 6 111 IPR044567 GO:0080188
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi201g00061 Sebi-Chr201 1440789 1441179 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi201g00061 6 68 RAD5 or RAD16-like Gene Family AT3G16600 41.270 9.03e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi201g00061 K10875 - qsu:112017743 186.422