Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi201g00037 ATGTTTTGTGTTTCACCAAGACAAAGTAGCACAATGGAGCAGCCACAGCTCTTAGTGGACGAAAACTTCCCTCTCTTCAAATCAACCAGCAAACCCTCAAAAAACCCCTCACCCTCCGCCATCAACAACAACAATCCTAACTCCGATGCCAAACACTCAGAAGCCACCGCCAATAAAACCCCTAATTTTGATGCTGAAAACTTCAAAGACACTGCCCCAGCCACGACGTTCGCTGATCTTGGACTTGCAGAATGGGCGGTGCAGACATGCAAGGCGCTCAGAATGCAGGTGCCGTGGCGCGTGCAGTGGCAGTGCATCCCAAGGGTCCTGGAGGGCCGCCACGTACTCTGCATCGACGAGACGGGCAGCGGCAAAACGGCGGCATTTGCCCTCCCCATCCTGCATCGCCTCGCTGAGCACCCGTTTGGCGTGTTCGCCCTTGTGGTGACTCCCACCCGCGAGCTTGCCTTCCAGCTTGCCGAGCAGTTCCGCGCCCTCGGCTCCTCCATCTGCCTCCGCATCGCCGTGGTGGTTGGCGGGATGGACATGCTCAAACAGGCCAGGGACTTGATCGACAGGCCTCACATTGTCATCGCCACCCCCGGGAGAGTCAAGCTCTTGCTTGAGGATAATCCTGATATCCCTCCTATTTTCTCTAGGATTAAGAATAAAAAAGGAGACTGGCTGGCTGCAGCAATGACAAAAGGCTCATGGTAA 717 0.5523 MFCVSPRQSSTMEQPQLLVDENFPLFKSTSKPSKNPSPSAINNNNPNSDAKHSEATANKTPNFDAENFKDTAPATTFADLGLAEWAVQTCKALRMQVPWRVQWQCIPRVLEGRHVLCIDETGSGKTAAFALPILHRLAEHPFGVFALVVTPTRELAFQLAEQFRALGSSICLRIAVVVGGMDMLKQARDLIDRPHIVIATPGRVKLLLEDNPDIPPIFSRIKNKKGDWLAAAMTKGSW 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi201g00037 238 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 106 238 IPR014001 -
Sebi201g00037 238 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 50 209 - -
Sebi201g00037 238 MobiDBLite consensus disorder prediction 26 65 - -
Sebi201g00037 238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 211 IPR027417 -
Sebi201g00037 238 Pfam DEAD/DEAH box helicase 100 209 IPR011545 GO:0003676|GO:0005524
Sebi201g00037 238 MobiDBLite consensus disorder prediction 1 68 - -
Sebi201g00037 238 MobiDBLite consensus disorder prediction 1 17 - -
Sebi201g00037 238 SMART ultradead3 94 238 IPR014001 -
Sebi201g00037 238 Gene3D - 39 223 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi201g00037 Sebi-Chr201 963360 964319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi201g00037 98 204 Eukaryotic Initiation Factors Gene Family AT5G11200 40.000 9.13e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi201g00037 K14778 - gmx:100804060 254.218