Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi201g00035 ATGCTGGAAGTGCTTGATCAAGAAGCTGCAGCTCTATATTCATACAAAACTCAGGTTCAGAGGCTCGAGGCACTCAATCAATTTAAATCAGGAAAGGTTTCTGTACTACTTACAACTGATGTTGCCTGCTGTGGTTTGGATATTCCTACAGTTGACCTTGTTATCAATTATGATGTTCCAAGCATTCCACGAAATTATATTCATCGTGTAGGTCGTACTGCAAGAGCGGGTAGAGGAGGACTGGCTTTGAGCCTCGTCACCCAGAATGATGTTGATCTCATTCATGAAATAGAGACTCTTATTGAAAGGCAACTTGAAATGATTGAATACAAAGAAAATGAGGTGCTTTCTCTCATGAAAAAGGTTTTCAGTGCTAAGAATGTAGCAGAAATGAAGATGATGGGTTTGAGGAGAAAGGAAAAAAGCGGAAAAAACAAAAACTGA 444 0.3941 MLEVLDQEAAALYSYKTQVQRLEALNQFKSGKVSVLLTTDVACCGLDIPTVDLVINYDVPSIPRNYIHRVGRTARAGRGGLALSLVTQNDVDLIHEIETLIERQLEMIEYKENEVLSLMKKVFSAKNVAEMKMMGLRRKEKSGKNKN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi201g00035 147 CDD SF2_C_DEAD 1 86 - -
Sebi201g00035 147 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 3 122 - -
Sebi201g00035 147 Gene3D - 2 147 IPR027417 -
Sebi201g00035 147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 115 IPR027417 -
Sebi201g00035 147 Pfam Helicase conserved C-terminal domain 8 77 IPR001650 -
Sebi201g00035 147 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 116 IPR001650 -
Sebi201g00035 147 SMART helicmild6 1 77 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi201g00035 Sebi-Chr201 957466 959311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi201g00035 10 106 Eukaryotic Initiation Factors Gene Family AT3G19760 39.175 2.78e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi201g00035 K14778 - gmx:100798597 220.705