Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi201g00017 ATGAGATTGTTCCGGGGATATGCCATAACAGCAGCAGTGAGGGAAGGTCATCTAAAAATATTGGAGGTCCTTATCAATTCTGGGGCATCACAGCTTGCATGCGAGGAGGCTTTAATGGAAGCAAGCTATGTGGGACGGGCCAGATTTGCTGAACTACTCATGCGGTCCAACATGATCCGTCCTCAGGTTGCAATTCATGCCCTTGTCTCTGCCTGTTGCAGAGGCTTTATTGAGGTTGTTGATGTACTCCTCAAGTATGGAGTGGATGCCAATGCAATTGATAGGACGCTGCTTCAATCTTCAAAGCCATTTCTTCACGCTAATGTTGATTGCAGTGCATTATTCGCTGCTGTTGTCAGCAGGCAGATTAATGTTGTTAGATTACTGTTGCAGGTTGGTGTTAGAGTAGATATCAAGGTCAATCTAGGGGCTTGGTCATGGGAGACGGATACAGGAGAAGAATTTCGTGTGGGTGTTGGACTAGCTGAGGCTTATCCAATCACCTGGTGTGCTGTGGAGTATTTTGAATCCAGTGGTGCTATATTGCATATGCTGCTTTGTCACCTCCCGCCTAATACTTTGCACATTGGGAGGACTCTCTTGCACCATGCCATCGTTTGTAACAATGAAAAAGCATTAAATATACTTTTAAATAGTGGTGCAGATGCGGAAGCGGTAGTGCAAACTACTGAAGAAACCAATGTACACCCTATTCATATGGCTGCAAGGCTTGGATCATGCAACATTCTTCAGTGCCTGATTAATGGTGGTTGTAGCTTGGACTCCCAAACAAAATCTGGAGATACAGCATTGATGATCTGCACAAGGTATAAACATGAGAGGTGCCTTAGAGTCCTAGTATCAGCAGGTGCAGATTTGGGGTTGGTAAATTCATCTGGTCATTGTGCAACTTCAATCTCAAACTCTGTTCAGTGGACTAAAGTATTCCAGACAGCAATTTTAGATGCAATAAGAGCCGAAAAGGAAGTTAAATCAAGCAATGCCTCTAGATTTTCTGCTTTGTTATTTGTGACTCGTTCAAATGACACAGAGGGACTGAAGAAACTCATTGAAAACAAGAACGTAGATCTTGATGAGCAAAATGGCAATGGATTTTCAGCTGCCATGATTGCTGTGGCAGGGGGTAACGTGGAGACTTTCAGGTTGCTTCTCTATGCTGGGGCTGATGTAACCAAGCTTAAAAACAAGTATGGTTTGACAGCCCTTAACCTCATAGACGCCAGCCAAAATGGGGAAGCATTTTACAAGGTAATGCTTGAATATGCACTTAACAACGGATGCGATGGTTCAATTGAGGTGAACCCTCTCCACCGTGCAACTCGCTATGGGGACATGGACATTGTTCATAAATTATTGAAAGAAGGGTATGATGTCAATGCTTTTGATGGAGATGGATATACCCCATTGATGTTAGCTGCAAGAGGATGCCTTGGTGAAATGTGTGAGCTTTTGATCTCATGTGGAGCCAAATGTGATATTCAGAATGAGAGACATGAGACAGCACTTTCACTTGCCAGAGAAAATGGTACAGGAAATTATGCAGAGCGTGTGATATTGGATGAGCTAGCTCGAAGAGTAGTCTTGTGTGGGGCTTGTGTAAAGAAACATACCAAGTGTGGTAAAGGGTCACCTCACAGTAAGCAACTGGTAATGGTGGGGGCTGCTGGAATTTTACGTTGGGGAAAATCAGATAAGAGAAACGTGGTTTGCAAAGAAGCTGAGGTTGGACCAAGTGCAAAATTTCGATGGAATCGCCGGAAGAAGTTTGATGTTGATGAGCCAGGAATGTTTCATGTAGTCACTACAAAAAATAAGCAGGTGCATTTTGTATGTGAAGGTGGGGTTGAAATGGCTGAGTTGTGGGTAAGGGGTATTAAATTAGTAACAAGAGAAGCCATTTTTGGCCAAAGAACTGATAACGTCTGA 1947 0.4345 MRLFRGYAITAAVREGHLKILEVLINSGASQLACEEALMEASYVGRARFAELLMRSNMIRPQVAIHALVSACCRGFIEVVDVLLKYGVDANAIDRTLLQSSKPFLHANVDCSALFAAVVSRQINVVRLLLQVGVRVDIKVNLGAWSWETDTGEEFRVGVGLAEAYPITWCAVEYFESSGAILHMLLCHLPPNTLHIGRTLLHHAIVCNNEKALNILLNSGADAEAVVQTTEETNVHPIHMAARLGSCNILQCLINGGCSLDSQTKSGDTALMICTRYKHERCLRVLVSAGADLGLVNSSGHCATSISNSVQWTKVFQTAILDAIRAEKEVKSSNASRFSALLFVTRSNDTEGLKKLIENKNVDLDEQNGNGFSAAMIAVAGGNVETFRLLLYAGADVTKLKNKYGLTALNLIDASQNGEAFYKVMLEYALNNGCDGSIEVNPLHRATRYGDMDIVHKLLKEGYDVNAFDGDGYTPLMLAARGCLGEMCELLISCGAKCDIQNERHETALSLARENGTGNYAERVILDELARRVVLCGACVKKHTKCGKGSPHSKQLVMVGAAGILRWGKSDKRNVVCKEAEVGPSAKFRWNRRKKFDVDEPGMFHVVTTKNKQVHFVCEGGVEMAELWVRGIKLVTREAIFGQRTDNV 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi201g00017 648 ProSiteProfiles Ankyrin repeat profile. 196 228 IPR002110 GO:0005515
Sebi201g00017 648 Gene3D - 192 319 IPR036770 -
Sebi201g00017 648 ProSiteProfiles Ankyrin repeat profile. 471 503 IPR002110 GO:0005515
Sebi201g00017 648 ProSiteProfiles Ankyrin repeat profile. 233 265 IPR002110 GO:0005515
Sebi201g00017 648 ProSiteProfiles Ankyrin repeat profile. 266 298 IPR002110 GO:0005515
Sebi201g00017 648 ProSiteProfiles Ankyrin repeat profile. 370 402 IPR002110 GO:0005515
Sebi201g00017 648 PANTHER ANKYRIN REPEAT-CONTAINING 3 629 - -
Sebi201g00017 648 Pfam Ankyrin repeats (many copies) 347 391 IPR002110 GO:0005515
Sebi201g00017 648 SUPERFAMILY Ankyrin repeat 8 143 IPR036770 -
Sebi201g00017 648 SUPERFAMILY Ankyrin repeat 197 524 IPR036770 -
Sebi201g00017 648 ProSiteProfiles Ankyrin repeat region circular profile. 196 225 - -
Sebi201g00017 648 Gene3D - 426 531 IPR036770 -
Sebi201g00017 648 ProSiteProfiles Ankyrin repeat region circular profile. 438 469 - -
Sebi201g00017 648 ProSiteProfiles Ankyrin repeat region circular profile. 471 503 - -
Sebi201g00017 648 SMART ANK_2a 370 399 IPR002110 GO:0005515
Sebi201g00017 648 SMART ANK_2a 233 262 IPR002110 GO:0005515
Sebi201g00017 648 SMART ANK_2a 196 225 IPR002110 GO:0005515
Sebi201g00017 648 SMART ANK_2a 438 467 IPR002110 GO:0005515
Sebi201g00017 648 SMART ANK_2a 266 295 IPR002110 GO:0005515
Sebi201g00017 648 SMART ANK_2a 471 500 IPR002110 GO:0005515
Sebi201g00017 648 SMART ANK_2a 109 138 IPR002110 GO:0005515
Sebi201g00017 648 SMART ANK_2a 336 366 IPR002110 GO:0005515
Sebi201g00017 648 SMART ANK_2a 63 92 IPR002110 GO:0005515
Sebi201g00017 648 SMART ANK_2a 4 33 IPR002110 GO:0005515
Sebi201g00017 648 Gene3D - 320 425 IPR036770 -
Sebi201g00017 648 ProSiteProfiles Ankyrin repeat profile. 438 470 IPR002110 GO:0005515
Sebi201g00017 648 Gene3D - 4 149 IPR036770 -
Sebi201g00017 648 ProSiteProfiles Ankyrin repeat region circular profile. 370 397 - -
Sebi201g00017 648 Pfam Ankyrin repeats (3 copies) 235 295 IPR002110 GO:0005515
Sebi201g00017 648 Pfam Ankyrin repeats (3 copies) 412 502 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi201g00017 240 419 Ion Channels AT2G25600 30.055 2.37e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi201g00017 - - gmx:100795638 1125.54