Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi201g00015 ATGGCGGCTGGTAGACATGGAGGTTATCGCGACAATGAGTTTAGGGACCGTGAGTCCAATTTCAATGTTTCAAGGCGGGTTTTTAACAATAATTCCAAAGAAGAGTATGGTATGATTAGTAATGGTAGCCACGATGTTGCGAGGAATGGGAGCAGGGATGCAAGAGATAGGATTAGACAGAGACACAGAGATATTAGGGAGAGAGAAGCTTCGAATGGCAGTTACCGATCTTCTTCCAGCAGGAGCGACTCCGGCAGCAGTGGCGGTAGCCGTAGTGGCAAGCTTGGTCCCAGAAAGTGTGGGTTTTCTATCAAGACTGTGGATAGAGAGCCAGGTGAGCTCTCTAGTGAGAGTGGCCCTGATGATGGTGTTGAATCAGAATCATTGATGAAAGTAAACGGGACTCTATCTTCGGTAGACAGGAAAAGAAAATTTTCACCAATAGTGTGGGATCAGGATGACAAAGAAGTGAATAATTTATCAAAACTTAGGGTTGCCGCAACAGTGACTGCTCTTCCTCCTGCACCTCCACTTCCAAAGGCATTCGGTAAATCACCTAATGTTCCTTGCAATGGATTTAAAGTTCATCCTGTCAAAAGCAGAGAAGCTGGGAATCTTAAGGAGCCGACTGCAGCTAGCCCTTCTTTGCTGTCTGAGTCAGTTCAGGATGCTGAATCTGAGTCTCCTGTAGGTTTGCATTCATTGTTTCCAGAGAAGAGGTGGGGTAATGAGCAGGAAGCTGAGCAACCAGAAGATGAAGATTATGTTCCAACTCATAACATATCATCTTCAAGATGGGCGTATGGAGATGACTCTCCTGGTGATGAAGGTGAAATCAATGATGACAAGGAAATCCTTAAAAGGAGGAGGAGACTATCTCCTGAGCTGGGTATGAGAGCGAGAGCCAAATCATCTGAATCGGAAGAAAGAGCTAGCCTAGGGAGATCATCCACTGGAGATGATCATCCAGGTATTGAGTCAGAGAAGGATGACTATATGGAGATTGATGGTCAAGGTTGCAAAAGTGATACTAGTGGTAATCCCTCATATACAGATTCTGAAGATGGAGATGATAGCAGTGAAACTCCAGAACCTCCAGCTCCGCCACACAGAGTTGTCAACATGCTTCAGGGCTGTAGAAGTGTTGATGAGTTTGAGAGACTGAACAAGATAGATGAAGGAACATACGGTGTTGTATATAGGGCCAGAGATAAGAAGACTGGAGAAATTGTGGCATTGAAAAAGGTAAAGATGGAGAAGGAGAAAGAAGGCTTTCCACTGACTTCTCTTAGGGAAATAAACATACTTCTTTCATTTCACCACCCATCCGTAGTTGATGTTAAGGAAGTAGTGGTAGGGAGTAACCTTGATAGTATTTTCATGGTTATGGAATACATGGAACACGATCTTAAAGGACTAATGGAGTCAATGAAGCAGCCATTTAGCCAAAGTGAAGTAAAATGCTTAATGCTTCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCACAGGGATTTGAAGACTTCAAACCTTCTTCTGAATAATAGGGGTGAGTTAAAAATTTGTGATTTTGGATTGGCTCGTCAGTATGGGAGTCCATTGAAACCATATACACAATTGGTGGTTACTCTATGGTACAGGGCTCCTGAACTTCTTCTAGGGACAAAACAGTATTCAACCGCTATTGACATGTGGTCGCTGGGTTGTATAATGGCTGAGCTATTGTCCAAGGAACCACTATTTAATGGGAAGACTGAATTTGATCAACTTGACAAGATTTTCAGAATTCTTGGCACACCAAATGAAACAATTTGGCCTGGGTTCTCAGAATTACCTCGAGTCAAGGTCAATTTTGTAAAGCATCAGTATAATCTCCTGCGTAAAAAGTTTCCTGCAACATCATTCACTGGATCTCCAGTTCTTTCTGATTCTGGATTTGATTTGCTAAACAAGCTTCTTACTTATGACCCTGAAAAGAGGATCACAGCTGAAGATGCTCTCAATCATGAGTGGTTTCGTGAAGTTCCCCTTCCCAAGTCTAAAGAATTCATGCCCACGTTCCCTGCTCAACATGCACAAGACAGGCGGACGCGGAGAATATTGAAGAGTCCACATCCATTAGAGGAGCAAGTCCGGAAGGAGTTGCTGCAGGGCGAACCAGGGGCTGGTGGTGAGAGTATGCAGGGAAAGGAAGTTGGAGACATTGTTTGTTAG 2226 0.4367 MAAGRHGGYRDNEFRDRESNFNVSRRVFNNNSKEEYGMISNGSHDVARNGSRDARDRIRQRHRDIREREASNGSYRSSSSRSDSGSSGGSRSGKLGPRKCGFSIKTVDREPGELSSESGPDDGVESESLMKVNGTLSSVDRKRKFSPIVWDQDDKEVNNLSKLRVAATVTALPPAPPLPKAFGKSPNVPCNGFKVHPVKSREAGNLKEPTAASPSLLSESVQDAESESPVGLHSLFPEKRWGNEQEAEQPEDEDYVPTHNISSSRWAYGDDSPGDEGEINDDKEILKRRRRLSPELGMRARAKSSESEERASLGRSSTGDDHPGIESEKDDYMEIDGQGCKSDTSGNPSYTDSEDGDDSSETPEPPAPPHRVVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSVVDVKEVVVGSNLDSIFMVMEYMEHDLKGLMESMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTQLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRILGTPNETIWPGFSELPRVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEDALNHEWFREVPLPKSKEFMPTFPAQHAQDRRTRRILKSPHPLEEQVRKELLQGEPGAGGESMQGKEVGDIVC 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi201g00015 741 MobiDBLite consensus disorder prediction 8 22 - -
Sebi201g00015 741 MobiDBLite consensus disorder prediction 720 741 - -
Sebi201g00015 741 MobiDBLite consensus disorder prediction 72 91 - -
Sebi201g00015 741 Gene3D Phosphorylase Kinase; domain 1 370 467 - -
Sebi201g00015 741 MobiDBLite consensus disorder prediction 23 38 - -
Sebi201g00015 741 MobiDBLite consensus disorder prediction 48 71 - -
Sebi201g00015 741 ProSiteProfiles Protein kinase domain profile. 385 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi201g00015 741 FunFam Cyclin-dependent kinase G-2 468 707 - -
Sebi201g00015 741 MobiDBLite consensus disorder prediction 279 337 - -
Sebi201g00015 741 MobiDBLite consensus disorder prediction 211 227 - -
Sebi201g00015 741 PANTHER CELL DIVISION PROTEIN KINASE 383 682 - -
Sebi201g00015 741 SUPERFAMILY Protein kinase-like (PK-like) 377 682 IPR011009 -
Sebi201g00015 741 FunFam cyclin-dependent kinase G-2 isoform X1 370 467 - -
Sebi201g00015 741 Gene3D Transferase(Phosphotransferase) domain 1 468 707 - -
Sebi201g00015 741 SMART serkin_6 385 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi201g00015 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Sebi201g00015 741 CDD STKc_CDC2L1 379 676 IPR045267 GO:0004674|GO:0005524|GO:0006468
Sebi201g00015 741 MobiDBLite consensus disorder prediction 199 371 - -
Sebi201g00015 741 MobiDBLite consensus disorder prediction 1 145 - -
Sebi201g00015 741 Pfam Protein kinase domain 385 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi201g00015 Sebi-Chr201 369469 372677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi201g00015 376 724 Core Cell Cycle Gene Families AT5G10270 45.055 2.13e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Sebi201g00015 Pkinase 1.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi201g00015 K08818 - gmx:100793729 1068.91