Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi200g00039 | ATGAAGATTGCTTCCTTCTTCACCAAGGCTTTCCACAGCTTCCCTTCCTACTCCAAGATCGTGCTCCTCTGCACTCTCAGTGGTGGCGGTGTGGTGTCATACTCAGAATTACAATCAAATACTAAACCTCCTGTTATAGATCCTAATGAGCCAAAGAAAAAGAAAGTGGTGGTTCTTGGAACAGGATGGGCTGGTACCAGTTTCCTGAAGGATCTAGATGCATCCCTATATGATGTTCAGGTTGTTTCACCACGTAACTACTTTGCATTCACTCCTCTATTACCCAGTGTCACTTGTGGGACTGTTGAAGCAAGAAGCATTGTGGAGCCAGTCAGAAACATCATAAAAAAGAGAAAAGGAGAAATTAAATTTTGGGAGGCAGAATGCCTGAAGGTTGATAATGCAAACAAAAAGGTTTTGTGTCGGTCCCATATTGACAACAATTTAGTGGGAAGTGGCGAATTTGCTTTGGACTATGACTACTTGGTTATAGCAATAGGAGCACAAGTAAACACATTTAACACCCCTGGTGTCAGGGAGAATTGTCATTTTCTGAAGGAGGTAGAGGATGCTCAGAAGATCAGAATGTCTGTGATAGATTGCTTTGAGAAGGCTGTTCTTCCATCTCTATCTGAAGAAGAACGTAGGACAAATCTGCATTTTATAGTTGTTGGAGGGGGTCCAACTGGTGTGGAATTTGCTGCTGAGCTTCATGACTATATCCAAGAAGACTTAGTCAAATTGTACCCATCTGTCAAAGATATAGTGAAGATAACAGTGATTCAATCAGGAGATCACATCTTAAACACGTTTGATGAAAGAATTAGTGCATTTGCTGAGCACAAGTTTGGAAGAGATGGTATAGAAGTTCAAACGGGATGTCGAGTTGTCAATGTTAATGACAAGGAAATTACAGTAAAAGTGAAATCAACAGGAGAGTTTTGTTCTGTACCCCATGGATTGGTTGTCTGGTCCACTGGAATTGCAACTCGGCCAGTTGTGAGAGACTTTATGGAACAAATTGGTCAGGCTGAAAGGAATGTCCTAGCAACAAATGAATGGCTGCGAGTGAAGGAATGTGATACTGTGTATGCTATTGGCGATTGTTCTTCAATAGTTCAACGTAAAATCATGGACGATATCTCAGAAGTTTTTGAAGCTGCAGACAGAGACAACTCTGGTACCTTAACTATTGAGGAATTCAATGATGTGATGGATGATATCATCGTAAGATATCCACAAGTTGAACTCTACTTGAAGAGCCAACATGTGATTGATTTGGCTGCTATGTGGAGAGATTCCCAAGGAAATGAGAAAAAAGAAATAGACATAGAAGGGTTTAAGCTGGCCCTTTCTCATGTGGATGCACAGATGAAGAGTCTACCAGCAACTGCACAGGTTGCTGCTCAACAAGGTGCGTATCTTGCTAGATGCTTTAACCGCATGGATCAGTGTGCAGAGAATCCTGAAGGTCCTCGACGATTTGGTGGATCTGGACGCTACAAGTTTCGTCCCTTCCGGTATAAGCATTTTGGACAATTTGCTCCTCTTGGAGGAGAGCAGGCAGCCGCAGAACTTCCTGGAGACTGGGTTTCCATGGGTCACAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGTACAAGGGTGTTAGTTATATCAGATTGGACTAGAAGATTCGTTTTTGGAAGAGATTCTAGTCGTATTTAG | 1728 | 0.423 | MKIASFFTKAFHSFPSYSKIVLLCTLSGGGVVSYSELQSNTKPPVIDPNEPKKKKVVVLGTGWAGTSFLKDLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEIKFWEAECLKVDNANKKVLCRSHIDNNLVGSGEFALDYDYLVIAIGAQVNTFNTPGVRENCHFLKEVEDAQKIRMSVIDCFEKAVLPSLSEEERRTNLHFIVVGGGPTGVEFAAELHDYIQEDLVKLYPSVKDIVKITVIQSGDHILNTFDERISAFAEHKFGRDGIEVQTGCRVVNVNDKEITVKVKSTGEFCSVPHGLVVWSTGIATRPVVRDFMEQIGQAERNVLATNEWLRVKECDTVYAIGDCSSIVQRKIMDDISEVFEAADRDNSGTLTIEEFNDVMDDIIVRYPQVELYLKSQHVIDLAAMWRDSQGNEKKEIDIEGFKLALSHVDAQMKSLPATAQVAAQQGAYLARCFNRMDQCAENPEGPRRFGGSGRYKFRPFRYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVISDWTRRFVFGRDSSRI | 575 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi200g00039 | 575 | ProSitePatterns | EF-hand calcium-binding domain. | 389 | 401 | IPR018247 | - | |
Sebi200g00039 | 575 | SUPERFAMILY | EF-hand | 371 | 461 | IPR011992 | - | |
Sebi200g00039 | 575 | FunFam | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial | 421 | 574 | - | - | |
Sebi200g00039 | 575 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 376 | 411 | IPR002048 | GO:0005509 | |
Sebi200g00039 | 575 | PANTHER | NADH DEHYDROGENASE | 49 | 575 | IPR045024 | GO:0003954|GO:0006116 | |
Sebi200g00039 | 575 | SMART | efh_1 | 380 | 408 | IPR002048 | GO:0005509 | |
Sebi200g00039 | 575 | Gene3D | - | 44 | 393 | - | - | |
Sebi200g00039 | 575 | Gene3D | - | 434 | 574 | - | - | |
Sebi200g00039 | 575 | SUPERFAMILY | FAD/NAD(P)-binding domain | 214 | 373 | IPR036188 | - | |
Sebi200g00039 | 575 | SUPERFAMILY | FAD/NAD(P)-binding domain | 53 | 272 | IPR036188 | - | |
Sebi200g00039 | 575 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 159 | 177 | - | - | |
Sebi200g00039 | 575 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 56 | 75 | - | - | |
Sebi200g00039 | 575 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 220 | 238 | - | - | |
Sebi200g00039 | 575 | FunFam | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial | 46 | 405 | - | - | |
Sebi200g00039 | 575 | Pfam | Pyridine nucleotide-disulphide oxidoreductase | 54 | 372 | IPR023753 | GO:0016491 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi200g00039 | Sebi-Chr200 | 1292144 | 1296640 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi200g00039 | 7 | 575 | Chloroplast and Mitochondria Gene Families | AT4G21490 | 64.049 | 0.0 | 766 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi200g00039 | K03885 | - | gmx:100793566 | 963.37 |