Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi200g00017 ATGGGGTGTTGTGTCTCAACAAGCAGTAGAAGTACTTGTAGTAGCAAGAGCTATGGAGACACGGTCTCTCCATCTTGTCTAGAAATGGGATTCTGTGGTCAAAAGAGAACAAGGAGAACATTCTCTGATCATGTTGTCTCTTTGCACAAGCTACCATCCTTACCAAACAGAATTTTCACTAATGGAAAGAGCCGGTCTTCTTGCATATTCACACAGCAGGGTCGTAAGGGTATTAATCAGGATGCCATGATTGTATGGGAAGATTTCATGTCAGAAGATGTGATCTTTTGTGGTGTCTTTGATGGCCATGGTCCACATGGTCACCTTGTTGCGCGCAAAGTCAGGGATGCGTTGCCAATAAAACTGCTTTCATGTTTGCATTCCTGTGAATTGAGGCAAAATGGTTCAGGTAAAGCTTGTTTTAAGGGTGACATAAAGCCTGAAAGTGGAGAGTCTGAGAAGGATTTCTCTGCTGAGGATACACTGAATTCTATGTGGAGAGATGCTTTCATGAAGGCATACAAGGCTATGGACAAAGATCTGAGGTCTCATCCAAATTTGGACTGCTTCTGTAGTGGGAGCACAGCTGTTACTATAGTGAAACAGGGTTCAAATTTGTTTATGGGCTATATTGGGGATTCTCGAGCAATCATGGGATCCAAGGACAATAATGACTTGATGGTGGCAATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGAGAAGCTGAAAGAATTAAACGATGCAAGGGTAGAGTATTTGCATTGCAAGATGAGCCAGAAGTTCCTAGGGTGTGGTTACCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGAGATTTTTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCATCAGTTGCTTACAGACAGAGATCAATTCATTGTTCTTGCCTCAGATGGGGTCTGGGATGTTTTGAGCAATGAAGAGGTGGTTGAGATAGTATCTTCAGCACCAAGTCGATCATCAGCAGCAAGGGTTCTGGTAGATTCTGCTGCTAGAGAGTGGAAACTCAAATATCCAACTTCAAAAATGGATGACTGTGCTGTTGTGTGCCTATTTTTGGATGGGAAAATGGACCCAGAATCTGATTGTGATGAGCCATGTTTTTCCTCTGCAACCATCCAGAGCAACCATTCAGGTAATCCAGTTGAGTCAGATGATGGTCAAAAGTCTGAGCCATCTTTACAAAGGAACTTTACTGTGAGATCCTCAGAAGAAAATGAGAACTTTGGAGGAGCATCTATTGATGTTGAAGATGGAACATCATTAGCTGAAGATCAAAACTGGTCAGGTCTGGAGGGTGTCACCAGAGTAAACTCACTGGTTCAACTTCCTAGATTTTCAGAGGAAAGGCCAAACTCTTGA 1413 0.4253 MGCCVSTSSRSTCSSKSYGDTVSPSCLEMGFCGQKRTRRTFSDHVVSLHKLPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDVIFCGVFDGHGPHGHLVARKVRDALPIKLLSCLHSCELRQNGSGKACFKGDIKPESGESEKDFSAEDTLNSMWRDAFMKAYKAMDKDLRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAIMGSKDNNDLMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHQLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPSRSSAARVLVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDPESDCDEPCFSSATIQSNHSGNPVESDDGQKSEPSLQRNFTVRSSEENENFGGASIDVEDGTSLAEDQNWSGLEGVTRVNSLVQLPRFSEERPNS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi200g00017 470 CDD PP2Cc 65 370 IPR001932 -
Sebi200g00017 470 MobiDBLite consensus disorder prediction 1 20 - -
Sebi200g00017 470 MobiDBLite consensus disorder prediction 388 426 - -
Sebi200g00017 470 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Sebi200g00017 470 PANTHER PROTEIN PHOSPHATASE 65 368 IPR015655 GO:0004722|GO:0006470
Sebi200g00017 470 Pfam Protein phosphatase 2C 141 348 IPR001932 -
Sebi200g00017 470 Gene3D - 57 372 IPR036457 -
Sebi200g00017 470 MobiDBLite consensus disorder prediction 388 446 - -
Sebi200g00017 470 SUPERFAMILY PP2C-like 58 372 IPR036457 -
Sebi200g00017 470 FunFam probable protein phosphatase 2C 52 57 373 - -
Sebi200g00017 470 SMART PP2C_4 55 368 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi200g00017 Sebi-Chr200 502830 505495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi200g00017 1 470 PP2C-type Phosphatase Gene Family AT1G03590 69.247 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi200g00017 - - gmx:100798340 842.417