Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi1g00060 | ATGGTGCAATCAAAGAAGTTCAGAGGTGTCAGGCAGCGTCATTGGGGTTCATGGGTCTCAGAAATTCGACATCCACTTCTGAAGAGAAGGGTGTGGCTAGGCACATTTGAAACAGCAGAGGAAGCAGCACGAGCATATGATCAAGCAGCCATTTTGATGAGTGGTCGAAATGCAAAAACCAATTTCCCAATAACCCAAACTCCAGAAGGTGACCCAAAGAGTGAGGAAAGCCCTTCCACCTCAAAGGATCTGGAAGAAATTCTACACGCAAAGCTTAGAAAATGTGGCAAGGTACCTTCCCCTTCCATGACCTGTTTGAGGCTTGACACAGAGAACTCCCACATCGGAGTGTGGCAAAAGCGTGCAGGGAGGAGTTCTGATTCAAATTGGGTGATGACGGTTCAGCTGGGAAACTCAAACAAGAGCACCAATGAGAGTAATAATGCTATGCCTTGTTCATCTGATTTACAGTCTCCATCAACAGGGGAAACAGGACAGGGAGTGGTGAGAGGAGGAGAGATTGATGAAGAGGAGAGAATTGCCCTCCAAATGATAGAGGAACTTCTCAATGACAGGAACTGTCCTAGTCCTAACACTACTTCATTTAACAATATACAACAACCTGAGGATCATGACAGCTTTTTTCTTTAA | 651 | 0.4531 | MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPITQTPEGDPKSEESPSTSKDLEEILHAKLRKCGKVPSPSMTCLRLDTENSHIGVWQKRAGRSSDSNWVMTVQLGNSNKSTNESNNAMPCSSDLQSPSTGETGQGVVRGGEIDEEERIALQMIEELLNDRNCPSPNTTSFNNIQQPEDHDSFFL | 216 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi1g00060 | 216 | CDD | AP2 | 5 | 65 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi1g00060 | 216 | Pfam | AP2 domain | 6 | 54 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi1g00060 | 216 | Gene3D | AP2/ERF domain | 5 | 65 | IPR036955 | GO:0003700|GO:0006355 | |
Sebi1g00060 | 216 | MobiDBLite | consensus disorder prediction | 191 | 216 | - | - | |
Sebi1g00060 | 216 | MobiDBLite | consensus disorder prediction | 138 | 165 | - | - | |
Sebi1g00060 | 216 | SMART | rav1_2 | 6 | 69 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi1g00060 | 216 | PRINTS | Ethylene responsive element binding protein signature | 29 | 45 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi1g00060 | 216 | PRINTS | Ethylene responsive element binding protein signature | 7 | 18 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi1g00060 | 216 | SUPERFAMILY | DNA-binding domain | 6 | 64 | IPR016177 | GO:0003677 | |
Sebi1g00060 | 216 | MobiDBLite | consensus disorder prediction | 192 | 210 | - | - | |
Sebi1g00060 | 216 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 3 | 148 | - | - | |
Sebi1g00060 | 216 | MobiDBLite | consensus disorder prediction | 60 | 82 | - | - | |
Sebi1g00060 | 216 | MobiDBLite | consensus disorder prediction | 138 | 170 | - | - | |
Sebi1g00060 | 216 | FunFam | Ethylene-responsive transcription factor 2 | 5 | 64 | - | - | |
Sebi1g00060 | 216 | ProSiteProfiles | AP2/ERF domain profile. | 6 | 63 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi1g00060 | 216 | MobiDBLite | consensus disorder prediction | 60 | 74 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi1g00060 | Sebi-Chr1 | 986212 | 986960 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi1g00060 | 1 | 190 | AP2-EREBP Transcription Factor Family | AT1G15360 | 63.500 | 1.99e-77 | 229 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Sebi1g00060 | AP2 | 8.5e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi1g00060 | - | - | gmx:100787517 | 326.25 |