Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1g00055 ATGCTGCAATATGAATATGAATGTCATATTGGGCTTCCTAATGATATTGGTGATGAGTTTGTCAGGCTGCGATGGTTCAATTTGATTACAGACTCTTCTGCAGAGAGGAATGCATTGCAAAACCTTGGCTTAAGAGGTTTTGAAGTGATCAATGATGCAAAATCACAAATAGAGGCCACATGCCCTGGTGTTGTCTCATGTGCTGACATTCTAGCATTAGCAGCCCGTGATGCTGTTGATTTGGTAAGTGATGGTCCAAGTTGGCCAGTACCCACAGGAAGAAGAGATGGGAGGATTTCTTTATCATCTCAAGCCTCAAGTTTGCCTTCTCCCCTTGATCCTGTTTCTATCCAAAGACAAAAATTTGCTGCCAAAGGTCTAGATGATCATGACCTTGTCACATTAGTTGGTGCACATACCATAGGCCAGACAGATTGCAGGTTCTTTAGTTATCGTCTATACAATTTCACCACCTCTGGAAATGCTGATCCAACTATAAACCTAGCTTTCTTAGCCCAACTTCAAGCACTTTGTCCAAAAAATGGAGATGGGTTGAGAAGGGTGGCTTTGGATAAAGATAGTCCAGCCAAATTTGATGTTAGTTTCTTTAAGAATGTACGAGATGGTAATGGAGTTCTAGAGTCTGACCAAAGGCTATGGGAAGATTCTGCTACACAAAGTGTGGTGCAAAATTATGCTGGGAACATTAGAGGGTTATTGGGGTTAAGATTTGATTTTGAATTTCCAAAGGCTATGATTAAGATGAGTAATATAGAGGTGAAGACTGGTAGTGATGGAGAGATTAGAAAAGTGTGTTCAAAATTTAATTGA 831 0.4031 MLQYEYECHIGLPNDIGDEFVRLRWFNLITDSSAERNALQNLGLRGFEVINDAKSQIEATCPGVVSCADILALAARDAVDLVSDGPSWPVPTGRRDGRISLSSQASSLPSPLDPVSIQRQKFAAKGLDDHDLVTLVGAHTIGQTDCRFFSYRLYNFTTSGNADPTINLAFLAQLQALCPKNGDGLRRVALDKDSPAKFDVSFFKNVRDGNGVLESDQRLWEDSATQSVVQNYAGNIRGLLGLRFDFEFPKAMIKMSNIEVKTGSDGEIRKVCSKFN 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1g00055 276 Pfam Peroxidase 32 234 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1g00055 276 PRINTS Plant peroxidase signature 205 222 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1g00055 276 PRINTS Plant peroxidase signature 45 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1g00055 276 PRINTS Plant peroxidase signature 64 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1g00055 276 PRINTS Plant peroxidase signature 84 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1g00055 276 PRINTS Plant peroxidase signature 189 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1g00055 276 PRINTS Plant peroxidase signature 130 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1g00055 276 PRINTS Plant peroxidase signature 250 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1g00055 276 CDD secretory_peroxidase 34 275 IPR033905 GO:0004601|GO:0042744
Sebi1g00055 276 PRINTS Haem peroxidase superfamily signature 131 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1g00055 276 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1g00055 276 PRINTS Haem peroxidase superfamily signature 84 96 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1g00055 276 PRINTS Haem peroxidase superfamily signature 65 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1g00055 276 PANTHER PEROXIDASE 25-RELATED 24 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi1g00055 276 FunFam Peroxidase 109 255 - -
Sebi1g00055 276 SUPERFAMILY Heme-dependent peroxidases 17 276 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi1g00055 276 ProSiteProfiles Plant heme peroxidase family profile. 28 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi1g00055 276 Gene3D - 32 276 - -
Sebi1g00055 276 Gene3D Peroxidase, domain 2 109 255 - -
Sebi1g00055 276 ProSitePatterns Peroxidases proximal heme-ligand signature. 131 141 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1g00055 Sebi-Chr1 903139 904666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1g00055 28 276 Peroxidase AT2G41480 72.691 1.80e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1g00055 K00430 - gmx:100816487 443.351