Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1g00040 ATGGTTAGATCCTGCTGGAAACCAACTGTTGAGGGTGATGATGGAGATGTAAATGGGAGAGTTGATGGGCTGCTATGGTACAAGGATTTGGGGAACCATCTCTATGGGGAATTCTCAATGGCTGTAATTCAAGCCAATAGTTCTTTGGAGGATCGTAGCCAACTTGAATCTGGACCTTTGAGTTCTGACTATTTGGGTCCTCAAGGGACCTTTATAGGTGTATATGATGGTCATGGTGGAACTGCAGCCTCACAGTTTGTCACTGACAATCTTTTCAGCAATTTCAAGAGCTGTGCTGCTGAACATCAAGGTATTTCAGAGAAGGTTATCAGAAAGGCCTTTGTGGCAACAGAAGAGGGGTTTCTCTCTCTTGTCAAGAAACAGTGGCTAAGCAAGCCACAGATTGCATCAGCGGGAGACTCAAGGGCGGTGTTAGGAAGAATGGAGAGAGCAACAAAGGAAACATTAGCTATTCAATTGTCTGCAGAACACAACGTTAACATAGAGACCGAGAGAGATGAACTTCGGTCAAAGCACCCCTATGATTCACAAATTGTGGTTATGAAACACAATGTTTGGCGTGTGAAAGGACTCATACAGGTTTCAAGATCCATAGGTGATGCATATCTGAAGAAAGCAGAATTTAACAAGGAGCCTCTACCATATAAGTTTAGACTACCTGAAACCTTCTTCAAGCCAATTCTTAGTTGTGAACCATCAATATCAATGCATAAACTCCATCCTGATGATCAATTTCTCATCTTTGCTTCTGATGGTTTATGGGAGCAGCTTAGCAACCAAGAGGCTGTTGATATAGTCAGCAATAACCCACGCAATGGAATTGCTAGGAGGCTTGTGAAAGCTGCACTTAGAGAAGCAGCTAAGAAGAGAGAAATGAGATTCTCAGATCTCCAAAAGATTGAACAAGGTGTGAGGAGACACTTCCATGATGATATTACAGTAATTGTTGTATTTCTAAATCCCAAATTGATTGATAATAGCTCTCTCTGGGGTTCTCCACTTTCAATCAGAGGAAGTGGGCATGCAAATTCTTAG 1056 0.4214 MVRSCWKPTVEGDDGDVNGRVDGLLWYKDLGNHLYGEFSMAVIQANSSLEDRSQLESGPLSSDYLGPQGTFIGVYDGHGGTAASQFVTDNLFSNFKSCAAEHQGISEKVIRKAFVATEEGFLSLVKKQWLSKPQIASAGDSRAVLGRMERATKETLAIQLSAEHNVNIETERDELRSKHPYDSQIVVMKHNVWRVKGLIQVSRSIGDAYLKKAEFNKEPLPYKFRLPETFFKPILSCEPSISMHKLHPDDQFLIFASDGLWEQLSNQEAVDIVSNNPRNGIARRLVKAALREAAKKREMRFSDLQKIEQGVRRHFHDDITVIVVFLNPKLIDNSSLWGSPLSIRGSGHANS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1g00040 351 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Sebi1g00040 351 ProSiteProfiles PPM-type phosphatase domain profile. 34 326 IPR001932 -
Sebi1g00040 351 Pfam Protein phosphatase 2C 68 295 IPR001932 -
Sebi1g00040 351 SUPERFAMILY PP2C-like 46 327 IPR036457 -
Sebi1g00040 351 CDD PP2Cc 35 326 IPR001932 -
Sebi1g00040 351 SMART PP2C_4 31 324 IPR001932 -
Sebi1g00040 351 PANTHER PROTEIN PHOSPHATASE 35 324 IPR015655 GO:0004722|GO:0006470
Sebi1g00040 351 Gene3D - 28 335 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1g00040 Sebi-Chr1 519682 521276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1g00040 1 347 PP2C-type Phosphatase Gene Family AT3G12620 64.499 3.28e-170 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1g00040 K01102 - gmx:100815902 557.37