Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1g00039 ATGGCAACTGCTGTGCAAGAAATTCGTCCTCCCACGTTGTCTCCCACCTCCGAACCACCACCCATCTTTGATGGAACAACCAGGTTGTACATGAGTTACTCATGCCCATTTGCACAACGCGTATGGATCACTAGGAACCACAAGGGATTGCAAGACAAGATCAGATTGGTTCCTATTGACCTTCAAAACAAACCTGCTTGGTACAAAGAGAAGGTCCACCCGGAAAATAAGGTACCATCTCTGGAACATGATGGCAAGGTTTTAGCAGAAAGTATTGACTTGATCAAATACTTAGATGCAACTTTTGATGGGCCATCGCTAATGCCTGATGACCCTGCTAAGAAGGAATATGGTGAGGAGCTGATAAAGTATGTTGATACTTTTACCAAAGATTTGTTTGGTTCGTTCAGGGGCGATCCCATAACGCAAACCAGTGCTTCATTTGACTATGTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCCTTCTTCCTTGGCGAATTTAGTTTGGTGGATATTACCTATATTCCATTTGTTGAAAGGTTCCGAAACGTCTTCTCCGAGATATATAAGCATGATATCACAGCTGGAAGGCCTAAACTAGCAGCATGGCTTGAGGAGCTGAACAATAACAATGCTTACAAGCAGACCAAACCTGATCCACAAGAGTTCGTTGACTTTGTCAAGAAGCGCTTCTTGGGTCAGTAG 708 0.4379 MATAVQEIRPPTLSPTSEPPPIFDGTTRLYMSYSCPFAQRVWITRNHKGLQDKIRLVPIDLQNKPAWYKEKVHPENKVPSLEHDGKVLAESIDLIKYLDATFDGPSLMPDDPAKKEYGEELIKYVDTFTKDLFGSFRGDPITQTSASFDYVENALGKFDDGPFFLGEFSLVDITYIPFVERFRNVFSEIYKHDITAGRPKLAAWLEELNNNNAYKQTKPDPQEFVDFVKKRFLGQ 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1g00039 235 SUPERFAMILY GST C-terminal domain-like 101 232 IPR036282 -
Sebi1g00039 235 SFLD Glutathione Transferase (cytosolic) 28 209 IPR040079 -
Sebi1g00039 235 FunFam Glutathione S-transferase L2, chloroplastic 1 103 - -
Sebi1g00039 235 Gene3D - 104 235 - -
Sebi1g00039 235 MobiDBLite consensus disorder prediction 1 21 - -
Sebi1g00039 235 SUPERFAMILY Thioredoxin-like 18 107 IPR036249 -
Sebi1g00039 235 Gene3D Glutaredoxin 1 103 - -
Sebi1g00039 235 SFLD Main (cytGST) 28 209 - -
Sebi1g00039 235 Pfam Glutathione S-transferase, N-terminal domain 29 105 IPR004045 -
Sebi1g00039 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
Sebi1g00039 235 Pfam Glutathione S-transferase, C-terminal domain 143 206 - -
Sebi1g00039 235 CDD GST_C_Lambda 111 229 - -
Sebi1g00039 235 PANTHER GLUTATHIONE S-TRANSFERASE L1 3 232 IPR044629 GO:0004364
Sebi1g00039 235 FunFam Lambda class glutathione S-transferase 104 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1g00039 Sebi-Chr1 498393 500767 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1g00039 7 233 Glutathione S-transferase Gene Family AT5G02790 66.079 2.20e-115 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1g00039 K00799 - gmx:100793025 364.77