Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1g00036 ATGATGGATATTCAGGAAGCAGAAAGAGTGGTTGTTGCCAAACCAGTTGCTTCAAGGCCTAGTTGTTCTACTTTCAAATCTTTCTCAGAGCTCTTAGCTGGTGCAATCAATGCCTCTCCCCCTATTGTATCTCCTCAAACTACAGTTTCTGCCATTAGACCAAAGACAGTGAGATTCAAGCCAGCTGTGAATAGCTCCCCTGCTGGGTCTGTTTCTTCTCAGTCCCTCATATACAAACCAATGCCAAAACTTGTGTCAAAAACAACTGTTTCTCTTTTGGCAAATATGGGAAATTGTAATACTAATCAGCAACAACCAAAGCAATCAATGGAGGCCAATCTTCAACATGCTAACCATGAAAAATTTAGAACCAATATGAGCTCAAATCTTCATCAGAACATCACCCCACATGCTGAAACATATCAGAACACTGAACCTTGTAAGATGGTACAACAGAACCTTGAGGAGGATCAAAAGGCTTTAACATCTACTATTAATGGTGATAGACCTTCTTATGATGGGTATAATTGGAGAAAATATGGACAGAAGCAAGTGAAAGGAAGTGAATACCCAAGAAGTTATTACAAGTGCACACATCCTAATTGTCCAGTGAAAAAGAAAGTTGAAAGATCATATGATGGACAAATTGCAGAAATTGTATACAAAGGTGAGCACAATCATCCAAAGCCACAGCTTCCTAAGCGCAACTCAACAGGGACACAAGGTTCAGGAATGATGTCTGATGGAATGGCTCAAGATATATGGAGTAATAATAATCAGAGTGAAAGGAATGAAGGCAATGAAGGTAGAATACAGAACCAGAATGACACAGGACTGTCTGTGCATTCAGCTTATCATGTCAAGGCTCCACAGCCTAATGATTCTGTGCTAATTGGTGCAATTAATGCTGGTGGAGGAAACTTAGAAAATTCTTGTGGTCTAAGTGGGGAATGTGAGGAAGGAAGCAAGGGATTTGAGGCAGAGGAAGATGAACCCAGAAGTAAAAGAAGGAAAAATGAGAATCAATCCAATGAAGCAGCTGTATCAGAGGAAGGTTTAGCAGAGCCACGCGTTGTGACACAAAGTTCTATTGATTCTGAAATACTTGGAGATGGCTTTCGCTGGAGGAAATATGGACAGAAGGTGGTGAAGGGAAATCCATATCCCAGAAGCTACTATAGATGCACTAATATCAAGTGTAACGTTCGCAAACATGTGGAGAGAGCAATAGATGACCCAAAATCATTTGTGACTACATATGAGGGAAAGCACAACCATGAGATGCCACTCAAGAACACAGCAAGTGTGGCCTCTGAGAAAGATTCACAGGCTTCTCTTAGTAAAGATAAACCATAG 1356 0.4071 MMDIQEAERVVVAKPVASRPSCSTFKSFSELLAGAINASPPIVSPQTTVSAIRPKTVRFKPAVNSSPAGSVSSQSLIYKPMPKLVSKTTVSLLANMGNCNTNQQQPKQSMEANLQHANHEKFRTNMSSNLHQNITPHAETYQNTEPCKMVQQNLEEDQKALTSTINGDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSYDGQIAEIVYKGEHNHPKPQLPKRNSTGTQGSGMMSDGMAQDIWSNNNQSERNEGNEGRIQNQNDTGLSVHSAYHVKAPQPNDSVLIGAINAGGGNLENSCGLSGECEEGSKGFEAEEDEPRSKRRKNENQSNEAAVSEEGLAEPRVVTQSSIDSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCNVRKHVERAIDDPKSFVTTYEGKHNHEMPLKNTASVASEKDSQASLSKDKP 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1g00036 451 Pfam WRKY DNA -binding domain 371 427 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi1g00036 451 Pfam WRKY DNA -binding domain 173 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi1g00036 451 MobiDBLite consensus disorder prediction 222 275 - -
Sebi1g00036 451 SUPERFAMILY WRKY DNA-binding domain 169 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi1g00036 451 MobiDBLite consensus disorder prediction 326 344 - -
Sebi1g00036 451 FunFam WRKY transcription factor 357 430 - -
Sebi1g00036 451 MobiDBLite consensus disorder prediction 315 358 - -
Sebi1g00036 451 ProSiteProfiles WRKY domain profile. 173 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi1g00036 451 Gene3D WRKY domain 354 430 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi1g00036 451 Gene3D WRKY domain 155 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi1g00036 451 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 103 444 IPR044810 GO:0003700
Sebi1g00036 451 MobiDBLite consensus disorder prediction 232 275 - -
Sebi1g00036 451 MobiDBLite consensus disorder prediction 422 451 - -
Sebi1g00036 451 FunFam WRKY transcription factor 152 231 - -
Sebi1g00036 451 SMART WRKY_cls 369 428 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi1g00036 451 SMART WRKY_cls 171 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi1g00036 451 ProSiteProfiles WRKY domain profile. 364 429 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi1g00036 451 SUPERFAMILY WRKY DNA-binding domain 364 429 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1g00036 Sebi-Chr1 467001 469233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1g00036 76 430 WRKY Transcription Factor Family AT2G37260 45.845 6.27e-89 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi1g00036 WRKY 6.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1g00036 - - gmx:100794069 731.095