Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1g00029 ATGTCGGGGCAAACACAGCGTCTGAATGTGGTCCCCACAGTGACAATGCTGGGAGTAGTGAAAGCTCGTTTGGTGGGAGCTACAAGAGGTCATGCCCTTCTGAAGAAGAAGAGTGATGCTCTCACCGTGCAGTTCAGGCAGATCCTGAAGAAGATTGTGTCCACCAAGGAATCAATGGGTGACATCATGAAAACCTCTTCTTTTGCCTTGACTGAGGCCAAGTATGTTGCTGGTGACAACATCAAGCATGTTGTGCTTGAGAATGTGAAAGAGGCTTCCCTCAGAGTCCGCTCTCGCCAGGAGAATGTTGCCGGAGTTAAGCTTCCCAAGTTTGATTACACTGCAGATGGAGAGGCCACCAAGAATGACCTCACTGGATTGGCAAGGGGTGGCCAGCAGGTGCAGCAGTGTCGTGCTGCTTACATCAAGGCAATTGAGGTTCTCGTTGAGCTTGCTTCCCTTCAAACCTCTTTCCTCACCCTTGATGAGGCCATCAAGACCACCAACCGTAGGGTCAATGCTCTTGAGAATGTGGTCAAGCCGAGGCTTGAGAACACCATTAGTTACATCAAGGGTGAGTTGGATGAGCTTGAGAGAGAGGATTTCTTTAGGTTGAAGAAGATTCAGGGATATAAGAAGAGGGAAATTGAGAGGCAGATGCAGTTGCAGGCTACCAAGGAACAGCTTGGTGACAAATTCCCTTTGCACAAAGGGGTTTCCTTCAATTCTCAAAACTTGTTGTCTGTGGCAGCTAACAAAGATGATGATATCATTTTCTGA 780 0.4808 MSGQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRQENVAGVKLPKFDYTADGEATKNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQMQLQATKEQLGDKFPLHKGVSFNSQNLLSVAANKDDDIIF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1g00029 259 FunFam V-type proton ATPase subunit D 1 199 - -
Sebi1g00029 259 Pfam ATP synthase subunit D 18 209 IPR002699 GO:0046961
Sebi1g00029 259 NCBIfam V-type ATP synthase subunit D 9 213 IPR002699 GO:0046961
Sebi1g00029 259 Coils Coil 180 200 - -
Sebi1g00029 259 Gene3D - 1 199 - -
Sebi1g00029 259 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 259 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1g00029 Sebi-Chr1 405030 405809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1g00029 1 259 Primary Pumps ATPases(2) AT3G58730 78.244 7.63e-148 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1g00029 K02149 - gmx:100808847 444.121