Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1g00019 ATGGGGAGGAAGGGAAATTGGTTTTCTACTGTGAAGAAAGCTCTCAGCCCTGACTCAAAGAAATCAAGTAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAGTTGCAGGCTCCAGACTCATCACACCCAGAAACTGATAAAGCACCACCTCTTCCTCCACCAGAAGAGATTAAATTAACTGAGATAGAAAATGAAAACAGTCACATTCATGTTGCTGAAGTAGCAACTGTTGTGGATGTTGAGGAACCTGTTCCTTCTGCTCAAACAGCAGTGGTTAAGGTTGAACCTACCACAATTGCTCGGTTTGCTGGTAAACCAAAGGATGAAGTTGCAGCAATCAAGATTCAAACAGCTTTTCGGGGGTACTTGGCAAGAAGAGCATTGCGGGCTTTGAGAGGGCTGGTCAGGTTGAAATCATTGATGGAAGGGCCCATTGTAAAACGCCAAGCAATGAGTACCCTCCGCTCTATGCAGACGTTAGCTCGCGTGCAATCTCAGATCCGTTCTAGGAGGATCAGAATGTTAGAGGAGAATCAGGCTCTACAGAAACAGCTCTTACAGAAGCATGCAAGAGAGCTTGAGAGCATGCGGATTGGGGAGGAATGGGATGATAGCCTGCAATCCAAAGAACAAATCGAAGCCAAGTTACTAAGCAAGTATGAGGCTGCTATGAGAAGAGAAAGAGCACTGGCTTATGCATTCACTCATCAGCAAAACTGGAAGAACTCATCTAGATCTATAAATCCAATGTTCATGGATCCAACCAATCCTAGCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCCAGGCCTTGGGAGGGTCGTAGCCTTATGGATAAAGAGCAGAATGACCATTCATCTGTAAAAAGTTCAAGCCGTAGCATTACTGGTGGAGGAGAAATCAGCAAATCATTTGCTCGTTTCCAGCTCAATTCTGAAGTACATTCTCCAGCAGCCAGTCAAAATCCTGGCTCACCTAGCTTCCCACCCCATTCAACTCCTTCCAGGCCAGCTTCTTCATCAGTTGGTAAGAAGCCAAAGAAGGTAAGCCCAAGGGGCAGCTGGATTATGGATGATGACTCCAAAAGCATGGTCAGTGTACAGTCAGACCGGTTCCGTAGGCACTCCATTGCCGGTTCAACAGTCAGAGATGATGAGAGCCTTGCTAGCTCTCCAGCAGTTCCAAGTTACATGGTGCCAACTCAATCTGCAAAAGCCAGGTCAAGGACACAAAGTCCATTAGCCACAGAAAATGGTAAAACAGAAAAGGGGTCCTTTGGGACTGCAAAGAAACGTCTTTCTTTCCCAGCTTCACCTGCCAGACCAAGGCGTCATTCAGGTCCACCAAAGGTAGAAAGCAGCAGCATAAATGCAGAGCTCACTGTGGAAAATGGTGTGGCCAGTTGA 1410 0.466 MGRKGNWFSTVKKALSPDSKKSSKSKKKWFGKQKLQAPDSSHPETDKAPPLPPPEEIKLTEIENENSHIHVAEVATVVDVEEPVPSAQTAVVKVEPTTIARFAGKPKDEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGPIVKRQAMSTLRSMQTLARVQSQIRSRRIRMLEENQALQKQLLQKHARELESMRIGEEWDDSLQSKEQIEAKLLSKYEAAMRRERALAYAFTHQQNWKNSSRSINPMFMDPTNPSWGWSWLERWMAARPWEGRSLMDKEQNDHSSVKSSSRSITGGGEISKSFARFQLNSEVHSPAASQNPGSPSFPPHSTPSRPASSSVGKKPKKVSPRGSWIMDDDSKSMVSVQSDRFRRHSIAGSTVRDDESLASSPAVPSYMVPTQSAKARSRTQSPLATENGKTEKGSFGTAKKRLSFPASPARPRRHSGPPKVESSSINAELTVENGVAS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1g00019 469 Gene3D - 87 136 - -
Sebi1g00019 469 Pfam Protein of unknown function (DUF4005) 385 445 IPR025064 -
Sebi1g00019 469 Pfam IQ calmodulin-binding motif 111 129 IPR000048 GO:0005515
Sebi1g00019 469 SMART iq_5 107 129 IPR000048 GO:0005515
Sebi1g00019 469 MobiDBLite consensus disorder prediction 315 469 - -
Sebi1g00019 469 MobiDBLite consensus disorder prediction 280 299 - -
Sebi1g00019 469 MobiDBLite consensus disorder prediction 395 424 - -
Sebi1g00019 469 MobiDBLite consensus disorder prediction 1 55 - -
Sebi1g00019 469 MobiDBLite consensus disorder prediction 451 469 - -
Sebi1g00019 469 PANTHER IQ-DOMAIN 5-RELATED 1 451 - -
Sebi1g00019 469 ProSiteProfiles IQ motif profile. 108 136 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1g00019 Sebi-Chr1 257741 261062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1g00019 1 469 IQD Protein Family AT5G03040 53.333 2.01e-152 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1g00019 - - gmx:100800080 698.353