Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi19g00073 ATGACAAAGAAGAAGAATCCCCTGGTGTTTATGGATGTGTCTATAGATGGTGATCCTGTTGAAAGGATGGTTTTTGAGCTTTTCCATGATGTTGCTCCAAAGACTACTGAAAATTTTCGTGCATTATGTACAGGAGAAAAGGGAGTCAGTCCAAATAGTGGAAAATCACTGCACTACAAGGGTTCTTTCTTCCATCACATTGTAAAGGGATCCATTGTGAGGGGTGGTGATTTTGTCAATCGAAATGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTTCCAGATGAGTCACCTAGGCTTAAGCATGATGCTCCAGGACTTCTATCCATGGCAATTGCTGATCGTGACACTCTTGGTTCTCATTTTATCATCACTTTGAAAGCTGATCACCATCTTGATAGAAAGCATGTAGTCTTTGGCAAGATTGTGCAAGGGCATAATGTATTGAAGAAAATTGAAGATGTGGGTGATGAAAAAGGACTTCCAACTGTAACTGTTAAAATAATTAATTGTGGTGAATATAATGATGATGGAAAGAAGACATGCAAGTCAAAAATAGGAAGGGATGGATTTTCTGAGGCCAATAATAGTCTTGAAGCACGGCGGAAGGGAAAGCAAAAAAAATCTTCAGGAGACAGAAGGAAAAGGAGAAAATACTACTCATCAGAATCAAATAGTTCTTCAGATTCAGACATGAATTCTTCAGAAAGTGATAGTGATTCTGACTCAGATGTGTCTTCATCATCTTACACAAGTTCCTCCAGTGATGATAGGCGAAGGAAGAGAAAGAGATCCAGGAAAGATAAACATAGACGTGGAAAAAGAAGAGATAAACATCGAGACAAGAGGCGGAGGAAACAAGATAAGAGATCAAAGCGTAAATCAAGAAGGGAATCAAGCAGTAATACTGATTCGGATAGTGAAAGTAAGGGTGACAACAGCTCTGATAACAAAAGTCTTGGTGCTCAAGGGAATCAGAAGAGTAAAGATCATTCTCAAAGAAATGCAGAAGATCAATCTTCCTTAGGTTTGGAGAAAGAATTACCTCCCATGCATCTCAAAAAGAGGGAGAGGATGGGTATGCTAGAGGAGGAAGAATTCCCAAAGGAAAATGGAGAGCGGCGTAGCAACGGCATTGGGGCCAAACATAAGTCTGACAGAAGTGCAGAGAGGCAGCCTGACGTGATGGATGATCATCCAGGGAAATCTAGGAGTCAAAGCATGAGTCCCAAGCGATCCATGAGTAAGAGTATGAGTATTAGTCCAAGGAGTGAGATCAAAAGCCCAAGCCTTAGTCCAAAAAGGAGATTAAGCAGAAGTCCAAGTGGTAGTAGAAGCCCTCGTGCTCCAACAGGGAGGAGTTTGAGCAGGAGTCCAGTGAGAGGCAGGAAGGGCAGAAGTGTCAGTAGAAGCCCTATGAGAACTCGTGATCATAGAAGTGTAAGTGAGAGCCCTGTGAGATCTCGTGATCGAAGAAGTTTCAGCAAGAGCCCTGTAAGATCTTTTACTCATAGCCACAGGAGCAAGAGTTCTCCTAGAGTATCATCGCGAAAAACAATCAGTAGAAGTCCTGTTAGAGTTTCAAGAAAGAGCATAAGCAGGAGTCCAGTTAAATCATCACGAATAACAATCAGTAGAAGCCCTGTAAGAGTGTCAAGAAAGAGCATAAGCAGGAGTCCGGTTAGATCATCACGAAGAACAATTAGTAGAAGCCCTGTAAGAGTGTCAAGAAAGAGCATAAGCAGGAGCCCAGTTAGATCAACACGAAGAACAGTTACTAGAAGCCCTGTAAGAGTGTCAAGAAAGAGCATAAGCAGGAGTCCAGTTAGATCATCACGAAGAACAATTAGTAGAAGCCCTGTAAGAGTGTCAAGAAAGAGCATAAGCAGGAGTCCAGTTAGATCATCTGCCCGAAGCTTAAGCAGAAGCTCTGGCAGGGTCCCTTTGAGAAACATTAGCCAAAGTCCAGTTAGAATGCCAAGCAGAGGCAATCGCCGCAGTTATTCTAGGAGTCGTAGTCCTGTTCGTAGGGCAAGGACACCTCGTGGGAGGAGTTTGTCAAGGAGTGCGTCACCTGATGCTTCACCAAAACGTATCAGGAGGGGAAGAGGTTTTAGTGAACGATACTCTTATGCTAGAAGGTATAGAACCCCCTCTCGGTCTCCTGTGCGGTCATACCGCTACAATGGAAGAAGTGACCGTGACAGATATTCAGGCTACAGAAGGTACTCCCCTAGGCGATTTAGGAGCCCACTACAACGTGGAAGGACTCCACCAAGGTACCGAAGTAGGAGAAGCAGAACACCATCTGTATCACGCAGTCCACATTACCGAGCTCGACGATATAGCCGAAGCCAGAGCCCAGTTCGCAGTCGTTCACCACCACGTGTGAATAGGCGAATATCATCATCTCAGAGCAGGAGTCGATCACGATCCAGGTCTTCAGTTGAATCACAATCTCCAAGAAAAGTTAGCAGAGACAACAGGTCAAGGTCTTCTTCTGGAAGCCCAGAGGGGAAGAAAGGCCTGGTCTCTTATGGAGATGGTTCTCCCGATTCAAGCTGA 2568 0.442 MTKKKNPLVFMDVSIDGDPVERMVFELFHDVAPKTTENFRALCTGEKGVSPNSGKSLHYKGSFFHHIVKGSIVRGGDFVNRNGTGGESIYGSKFPDESPRLKHDAPGLLSMAIADRDTLGSHFIITLKADHHLDRKHVVFGKIVQGHNVLKKIEDVGDEKGLPTVTVKIINCGEYNDDGKKTCKSKIGRDGFSEANNSLEARRKGKQKKSSGDRRKRRKYYSSESNSSSDSDMNSSESDSDSDSDVSSSSYTSSSSDDRRRKRKRSRKDKHRRGKRRDKHRDKRRRKQDKRSKRKSRRESSSNTDSDSESKGDNSSDNKSLGAQGNQKSKDHSQRNAEDQSSLGLEKELPPMHLKKRERMGMLEEEEFPKENGERRSNGIGAKHKSDRSAERQPDVMDDHPGKSRSQSMSPKRSMSKSMSISPRSEIKSPSLSPKRRLSRSPSGSRSPRAPTGRSLSRSPVRGRKGRSVSRSPMRTRDHRSVSESPVRSRDRRSFSKSPVRSFTHSHRSKSSPRVSSRKTISRSPVRVSRKSISRSPVKSSRITISRSPVRVSRKSISRSPVRSSRRTISRSPVRVSRKSISRSPVRSTRRTVTRSPVRVSRKSISRSPVRSSRRTISRSPVRVSRKSISRSPVRSSARSLSRSSGRVPLRNISQSPVRMPSRGNRRSYSRSRSPVRRARTPRGRSLSRSASPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYSGYRRYSPRRFRSPLQRGRTPPRYRSRRSRTPSVSRSPHYRARRYSRSQSPVRSRSPPRVNRRISSSQSRSRSRSRSSVESQSPRKVSRDNRSRSSSGSPEGKKGLVSYGDGSPDSS 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi19g00073 855 MobiDBLite consensus disorder prediction 349 406 - -
Sebi19g00073 855 MobiDBLite consensus disorder prediction 695 715 - -
Sebi19g00073 855 MobiDBLite consensus disorder prediction 180 855 - -
Sebi19g00073 855 MobiDBLite consensus disorder prediction 224 254 - -
Sebi19g00073 855 MobiDBLite consensus disorder prediction 670 684 - -
Sebi19g00073 855 Gene3D - 1 175 IPR029000 -
Sebi19g00073 855 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Sebi19g00073 855 MobiDBLite consensus disorder prediction 515 669 - -
Sebi19g00073 855 SUPERFAMILY Cyclophilin-like 4 178 IPR029000 -
Sebi19g00073 855 MobiDBLite consensus disorder prediction 728 743 - -
Sebi19g00073 855 MobiDBLite consensus disorder prediction 407 454 - -
Sebi19g00073 855 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Sebi19g00073 855 MobiDBLite consensus disorder prediction 315 330 - -
Sebi19g00073 855 MobiDBLite consensus disorder prediction 260 294 - -
Sebi19g00073 855 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Sebi19g00073 855 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Sebi19g00073 855 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Sebi19g00073 855 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Sebi19g00073 855 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Sebi19g00073 855 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Sebi19g00073 855 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Sebi19g00073 855 MobiDBLite consensus disorder prediction 787 820 - -
Sebi19g00073 855 MobiDBLite consensus disorder prediction 295 314 - -
Sebi19g00073 855 MobiDBLite consensus disorder prediction 471 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi19g00073 Sebi-Chr19 3414072 3420054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi19g00073 26 170 U-box Gene Family AT5G67530 39.456 7.57e-20 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi19g00073 K09566 - gmx:100800303 355.14