Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi19g00065 ATGGGACCATTTAGCGGAATAGCTCAAGATGTCAAAGGTAGAGCTAAATGCTATAAACATGATTGGATTGGTGCATGCTGTTCTGGCATAAGGATATTGGCTCCAACTTTCTACATATTCTTCGCTTCTGCTCTCCCTGTTGTTGCTTTTGGGGAGCAACTTAGTAGAGATACAGATGGAAGCTTGAGCACAGTGGAAACATTGGCATCTACTGCTATTTGTGGAATTATCCACTCAATATTTGGTGGTCAGCCTTTGTTGATTTTAGGAGTTGCTGAACCTACTGTTATAATGTACACTATTCTGTATGAGTTCTGCATAAAAAGGCCTGAACTAGGTGCCAAGCTTTTTCTGCCTTGGGCTGCTTGGGTTTGTGTCTGGACAGCACTCTTGTTGATTCTGCTTGCAGTATTTAACGCGTGTGCAGTTATCACTAGGTTCACAAGAATTGCAGAGGAATTATTTGGAATGCTAATTACGGTCCTTTTCTTTCAGCAGGCTATAAAGGAGAGCAAGATCATGGCGATATGGAGCAGGGTGGCTATGGGGTTTCATTGCAGATTATGGGGTTCCCATGATGGTGGTCTTTTGGACAGCACTATCTTATACTGTACCAATGTAGCTTCTAAGATGGCTCAACAGAAGGAATTTAACCTTCAAAAACCATCTGCCTACCACTATGATATTTTCCTGCTTGGAATAATGACTCTGATTTGCGGTATTCTTGGCCTTCCTCCAGCAAATGGAGTCCTTCCTCAGTCCCCCATGCATACAAAGAGTTTGGCAGTTCTTAGGAGGCAGTTGATACGAAAGAAGGTGGTGAAAAGTGCCAAGGAATGCATTAAGCAACAAGGGAGCAACTCTGAATTATATGGAAAGATGCAAGCTGTGTTTCTAGAAATGGATACAGCACCTACTGATAAAGAGTTGGAGACTTTGAAAAAGGCTGTGATGAAATCTAATGAGAAGGATGGTGCAAAGGAAAATTTTGATCCTGATAAACACATTGATGCTTATCTACCTGTCAGGGTAAATGAGCAAAGAATGAGCAACTTATTGCAGTCTCTCCTGGTTGCCCTATCACTTCTAGCCATCTCTGTCATCAAAAGGATACCTACTTCAGTTCTATGGGGATATTTTGCGTACATGGCAATTGATAGTCTTCCAGGGAATCAATTCTGGGAAAGGATATTACTTCTCTTCATCCCCCCAAGCCGGCACTACAAAATTTTGGAAAGTTCTCATGCTTCATTTGTGGAGTCAGTACCATTCAAGAGCATAGCTGCATTTACAGTTTTACAATTTGTATACTTTGTGATCTGTTACGGAGTGACATGGATACCTACAGGCGCAATCCTGTTCCCACTACCTTTCTTCTTTCTCATAACTATAAGAGAGCATTTGCTTCCAAAGCTTTTCAAGCCTAACCATCTTCAGGAACTTGATGCTGCTGAGTACGAGGAAATTGCTGGTGCTCCACATGCAACTCATAATATATCACTAAGGGACAAGGAGACAGGTGATAACGACAGTGATAAGAGCTCAGAGGATTATTATGATGCAGAAATATTGGATGAGATGACAACCCACAGGGGAGAGTTGAAACTTAGAACTGTTCACCCTGAAGAAGCAAACCGGATGTGA 1644 0.4191 MGPFSGIAQDVKGRAKCYKHDWIGACCSGIRILAPTFYIFFASALPVVAFGEQLSRDTDGSLSTVETLASTAICGIIHSIFGGQPLLILGVAEPTVIMYTILYEFCIKRPELGAKLFLPWAAWVCVWTALLLILLAVFNACAVITRFTRIAEELFGMLITVLFFQQAIKESKIMAIWSRVAMGFHCRLWGSHDGGLLDSTILYCTNVASKMAQQKEFNLQKPSAYHYDIFLLGIMTLICGILGLPPANGVLPQSPMHTKSLAVLRRQLIRKKVVKSAKECIKQQGSNSELYGKMQAVFLEMDTAPTDKELETLKKAVMKSNEKDGAKENFDPDKHIDAYLPVRVNEQRMSNLLQSLLVALSLLAISVIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFIPPSRHYKILESSHASFVESVPFKSIAAFTVLQFVYFVICYGVTWIPTGAILFPLPFFFLITIREHLLPKLFKPNHLQELDAAEYEEIAGAPHATHNISLRDKETGDNDSDKSSEDYYDAEILDEMTTHRGELKLRTVHPEEANRM 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi19g00065 547 PANTHER ANION EXCHANGE PROTEIN 205 490 IPR003020 GO:0005452|GO:0006820|GO:0016020
Sebi19g00065 547 Pfam HCO3- transporter family 3 171 IPR011531 GO:0006820|GO:0016020
Sebi19g00065 547 Pfam HCO3- transporter family 205 266 IPR011531 GO:0006820|GO:0016020
Sebi19g00065 547 Pfam HCO3- transporter family 342 433 IPR011531 GO:0006820|GO:0016020
Sebi19g00065 547 FunFam probable boron transporter 2 14 56 - -
Sebi19g00065 547 Gene3D Helical hairpin bin 14 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi19g00065 Sebi-Chr19 3011917 3016067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi19g00065 206 543 Antiporters AT1G15460 66.092 2.87e-160 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi19g00065 K24194 - gmx:100808880 545.043