Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi19g00063 ATGGATGGACATGGTGGCATTAATTTTTCCCTGACTCCGTATTTTGTAGAACATGATGTGAATTCTGTGAATCATCCTCATGATGTGAGGATGTTTTCAGTTTCCAATCAAGCAATTTCAGTTTCCATGGGACATCCATTCCTAAAGAACCATTTTTCAACTGTTGGTCAAAACATAAATGGTGCTAATGTGAAGCAACCACTGCTTGGAGGAATACGTGTTACTGCACCTCATTCAGTTCTTCCTATCACTGGGGTTGTTGCTGGAATGAATAAATCCTGTAATAGTGTGAAACCATCTGCACCCGATCCTCAACTTACTATCTTCTATGCGGGTACTATGAATGTCTTTGATGATATCTCCCCTAAGAAGGCACAAGCTATCATGTTGTTGGATGGGAATGGCTTAAACTATTGCTTTTCACTTTCAGTAATTATTTTTCCTAAGATATAA 453 0.3863 MDGHGGINFSLTPYFVEHDVNSVNHPHDVRMFSVSNQAISVSMGHPFLKNHFSTVGQNINGANVKQPLLGGIRVTAPHSVLPITGVVAGMNKSCNSVKPSAPDPQLTIFYAGTMNVFDDISPKKAQAIMLLDGNGLNYCFSLSVIIFPKI 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi19g00063 150 Pfam tify domain 104 131 IPR010399 -
Sebi19g00063 150 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 62 131 IPR040390 -
Sebi19g00063 150 SMART tify_2 99 134 IPR010399 -
Sebi19g00063 150 ProSiteProfiles Tify domain profile. 99 134 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi19g00063 Sebi-Chr19 2981904 2982559 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi19g00063 29 135 Tify Gene Family AT3G17860 47.321 5.87e-20 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sebi19g00063 tify 1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi19g00063 K13464 - gmx:100787821 182.185