Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi19g00061 ATGGATTTAAATAGTGAGGATTCTGCCATTAACTTGGCTGATGATAGGGATGTAAGCTATAGTGACAGGGAAATAAGTGATGATAGTGGAAGAGAGCGTGATATAACTACACAAGAGCAGATGGATACTGGGTTAGAAAATATCTTTGGTGAGCATGTAGAACATCCTAATTCAGAGGATCATGTAGAAGAATTAATTTCAAAGGATCAAGTACAAGAAAATATGCCAGAGGCAGAGGTTCGCAGGATAATAGATTTGTCTAGTAAAGACATAAAGGGTTTGGAGTTTGGAAGTGAAGAAGATGCTTATAATTTATATTTTTCATATGCCAAATGTCATGGCTTTGCTATGAGGAAAGATGATGTAATTCGGGATGTGAAAGGCAATGTTATTATGCGTCAGTATTTATGTAGCAAAGCTGGGTTGAGGGACAAAAAGCACTTTTTGAGGGTAGATCGTAAAAAAGATCATAGGCCTTTAACTCGTGTTAACTGTGAAGCAAAGTTGCGAGTTAGGTATGATTATAAGACTGGGAAATTCAAGGTGGTTTCATTTATTGAGTGTCACAACCATGAGTTAACTCCGGAAAAATTTGTCCCTTTAATTCCTTCATATCGTGGCTTGTCTAAAGGTGATAAAGCTCAAGTGGATGCACTACATTCTCATGGTGTTAGGCCATGTCAAATAATGGGTTACTTATTGGATCAAAAGGGAGGTTATGCCAATGTAGGATTTTGTAAAAAGGATTTATACAACTACATAGATGAGGTGATGCGTGGTAAGATTAAAGATGGTGATGCAATGGCTGCATTAAGTTATTTGCAAGGGAAAGCAGACAATGAACCAGTTTTTTCTCTAGGTTTTGTATGTTCTGATGATGGTAAATTGACCCACCTATTTTGGGTCGATGGAATTAGTCGTGCTGATTATCAATTTTTTGGAGATGTGGTTGGGTTTGATGCCACATACAAGAAGAACAAATATAGGTATCCGTTGGTTATATTTTCTGGTAAAAATCACCATTCTCAAACAATTATATTCGCTTGTGCTATAATTGCAGACGAGACCATTCAAACATATAAGTGGGTTCTTGAAATGTTTTGGAAATGTATGTTTAACAAGCATCCAAGTGCAGTAGCGACTGATGGTGATGGTGCCATGAGGGAGGCCATTAGGCAAGTATTTCCAAATGCATCTCACCGACTGTGTGCGTGGAACTTGAACAAGAATGCATGTGAAAATGTGAAGAATGCTAAATTTTTGGATGATTTCAAGAAAGCTATGTACAGTAATTTCACTGCAGAGCAATTTGAAGAGTTTTGGCACGAAATGGTTTCCAAACATAGTCTTCAAAATAACAGTTGGATTTTAAAGACTTATGACAAAAAGGAAATGTGGGCTACTGCATATTTGCGTGACAAGTTTTTTGGACGTATAAGGACTACTTCGGAATATAGGTACAATGAATTGCTAGCTGATTTCAAGTCTCTTTATTCTGAACCTGTATTGACTACTTCTCTTCAGAGTGTGGAGCGCCATGCTGCCAAGCTACACACTCTTGATATTTTTAAAGATGTGAAACATGAAATTGATAGAGCAGGCTCTTTAAATGTTATTGAGCGTTTAGATGATGGTGAAAGTGTCATGTTTAGGATGAATCAATATTGTAATCCTCGGAGAGAACATGTATCATTAGATAAGGAAGATAATAAATTTCAATGTGGCTGTAGATTGTTTGAATCATGTGGCATCCCTTGTCGTCACATATTCTGTGCAATGAGGCTTGAGCACATGGAATCTATTCCTCCCAGTTTGATTTGCAAACGCTGGACGAAGGATATGAAGACTCATTTGTTGATGTCAGGTGGGTTTGATGAAGTGGAACCTGACATTATGCGGGTGTCTCGTTTTGTTGTTTTAGTATCATCTTGCAATTCTCTTTGTGACATGGCTTCAAAAAATCCTGATGATTTTAATGAGCTGAGAAAAGATTTATGGAGTTATGTGAAAAATATCAGAACAGGAGAAATCCTTATAGCAGAAAAAAAAGTTTCTGTTAAGGTTGTGGGTGATCCAAATGTGTCATTTGAACAAGAGGTGCCTTCTCAAAATGACAATAATATAAGTGCTAGCAATCAAGTTTCCAGAGGAGTTAGTTCTAGGGTAAAGAAGCATAATCCTTCCTCATCTACTCAAAATGTAACATTGTCTGCCCCTGACATTGGCCATAATCTCCAACCACATAATCAATTTATAGGTAGTTCATATATGGGTCATGTGCATATACGTGAAGGGATGTCAGTAGTTATCCCGTTTCAGCCTTCCTTTGGTGGTCAGGTCCCTATCTTGAATGGGAACTCTAATCCTAATGTTAATCCCATATTTCCAATGTTTCCCCTCCATAGTAATTTTCCTTCCAATCCAAATAACTCTGAGTTGCAGAACTCACATGCCCCTCCTAATGTAGCTGGATTTTCTGGTTGGAATGATTTGTTGCAACAAGTAATGAGGAACAGTGGGGGAACAGGTGGCTACCCTGGACAAAATTAA 2550 0.3776 MDLNSEDSAINLADDRDVSYSDREISDDSGRERDITTQEQMDTGLENIFGEHVEHPNSEDHVEELISKDQVQENMPEAEVRRIIDLSSKDIKGLEFGSEEDAYNLYFSYAKCHGFAMRKDDVIRDVKGNVIMRQYLCSKAGLRDKKHFLRVDRKKDHRPLTRVNCEAKLRVRYDYKTGKFKVVSFIECHNHELTPEKFVPLIPSYRGLSKGDKAQVDALHSHGVRPCQIMGYLLDQKGGYANVGFCKKDLYNYIDEVMRGKIKDGDAMAALSYLQGKADNEPVFSLGFVCSDDGKLTHLFWVDGISRADYQFFGDVVGFDATYKKNKYRYPLVIFSGKNHHSQTIIFACAIIADETIQTYKWVLEMFWKCMFNKHPSAVATDGDGAMREAIRQVFPNASHRLCAWNLNKNACENVKNAKFLDDFKKAMYSNFTAEQFEEFWHEMVSKHSLQNNSWILKTYDKKEMWATAYLRDKFFGRIRTTSEYRYNELLADFKSLYSEPVLTTSLQSVERHAAKLHTLDIFKDVKHEIDRAGSLNVIERLDDGESVMFRMNQYCNPRREHVSLDKEDNKFQCGCRLFESCGIPCRHIFCAMRLEHMESIPPSLICKRWTKDMKTHLLMSGGFDEVEPDIMRVSRFVVLVSSCNSLCDMASKNPDDFNELRKDLWSYVKNIRTGEILIAEKKVSVKVVGDPNVSFEQEVPSQNDNNISASNQVSRGVSSRVKKHNPSSSTQNVTLSAPDIGHNLQPHNQFIGSSYMGHVHIREGMSVVIPFQPSFGGQVPILNGNSNPNVNPIFPMFPLHSNFPSNPNNSELQNSHAPPNVAGFSGWNDLLQQVMRNSGGTGGYPGQN 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi19g00061 849 SMART 26again6 572 599 IPR006564 GO:0008270
Sebi19g00061 849 MobiDBLite consensus disorder prediction 697 733 - -
Sebi19g00061 849 MobiDBLite consensus disorder prediction 9 39 - -
Sebi19g00061 849 Pfam MULE transposase domain 316 410 IPR018289 -
Sebi19g00061 849 PANTHER OS01G0519700 PROTEIN 90 659 - -
Sebi19g00061 849 MobiDBLite consensus disorder prediction 1 41 - -
Sebi19g00061 849 Pfam FAR1 DNA-binding domain 105 194 IPR004330 -
Sebi19g00061 849 ProSiteProfiles Zinc finger SWIM-type profile. 559 597 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi19g00061 Sebi-Chr19 2936101 2939442 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi19g00061 MULE 7.3e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi19g00061 - - ccaj:109811679 743.421