Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi19g00025 ATGGCCGTGCTGAGAATGGCTCAGCATAACAATGCCAACAACAACGTTGGGAGCCAGAGCCAACAACAACAGCTAGTGAACACAGTGTTCCATGACTTTCTAGGCATGAAGAAGAAGAACCTCATCGATTCCAATGTCCTTCTTGCTGCTAATAAAACCCCCAATGTCCACGTCAGATCCTCTGACACCTCCCCCTCCCCTTCTTCCACCACCGTCTCCCGTGGCGGTGCCCCCTTCTCCACCACCTCTGACCTCGGTTCCGAAAGACAGGCAGGGAATCATCTTGAGGGAGTTCCTTTCTATGGCCCGAGGACTGATTTATCTGGAATTGAGATAGGTAACAGACTAGTGGGGAACAAGAGAAGTAATTCTGATTCATCTTTTATGGGTTCCTCTAGAGATGCCTTCCAAATGGTCCCTGATTCCTTTCAAAATTCACATTTGATGAAGATCCTCCGGAATGCAGCTGGAGGGGATCGCCATAGAAGGCCCAGTGATGAGGAAGTATTCCTTGGTATGCAATCACTGAAGCCAGGTTCTAGTTCTCAGACATTTCAGCCTCTCACTGGCACTAAGATTGATGCCAATAAATGGGAGCAGTCTATTCTCATGAACGTTGGCCCTTCCATGCAACATCCACCTCGTGGTGGTCAATTAACACCTTTTATGCACCAAATAACTTCAAACAAGATGAGGGATGCTGGTCCTTCATTTATTTCTCAGTCAGCTGCTGATGAAGGATCTAGAACTGGGATCAAGGGCCCTGGGATTTTGAGTTCTATAAACACAACCAGTGCTGCCGCTGAGAAAACTTCATCTGCAGTGCTGCTTGGGGGCAGTAGCAGACCGAAGCCTGTGACTAATATAGTAGACCCAGAATCTTCCACACCTCTGAGTCGACATGGATTGACATCTGCCAGCTGTCAGATGACTATTTTTTATGGAGGTCAAGCTCATGTGTTTGACAATGTCCAGCCTAATAAGGCAGATGTTATAATGGCTTTAGCTGGGTCAAATGGGGGATCTTGGTCCACAGCATTCTCACCCAAATCTTCTGCGAAGCTATTCCATGATAGTAACTTGCTAACTGGAGAAAATGAAACGGTTATAGTGAGTAACGAAGCACTCCCACAGGATCTTCGTGGGAGATTGTCTATTACCGGCAGTTCTAGTCGCGCCATAGGGACAGGTGATCGAGTAACTACTCTAACAGGGGTACATCAGGGAAGCATTGTAGCTAAAGATACAAGAAATCTGGTTCAAGCAGCAAATCCCAGTTCTGAAGATAAAAGAGCACAATGA 1302 0.467 MAVLRMAQHNNANNNVGSQSQQQQLVNTVFHDFLGMKKKNLIDSNVLLAANKTPNVHVRSSDTSPSPSSTTVSRGGAPFSTTSDLGSERQAGNHLEGVPFYGPRTDLSGIEIGNRLVGNKRSNSDSSFMGSSRDAFQMVPDSFQNSHLMKILRNAAGGDRHRRPSDEEVFLGMQSLKPGSSSQTFQPLTGTKIDANKWEQSILMNVGPSMQHPPRGGQLTPFMHQITSNKMRDAGPSFISQSAADEGSRTGIKGPGILSSINTTSAAAEKTSSAVLLGGSSRPKPVTNIVDPESSTPLSRHGLTSASCQMTIFYGGQAHVFDNVQPNKADVIMALAGSNGGSWSTAFSPKSSAKLFHDSNLLTGENETVIVSNEALPQDLRGRLSITGSSSRAIGTGDRVTTLTGVHQGSIVAKDTRNLVQAANPSSEDKRAQ 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi19g00025 433 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 112 366 IPR040390 -
Sebi19g00025 433 SMART tify_2 303 338 IPR010399 -
Sebi19g00025 433 MobiDBLite consensus disorder prediction 55 89 - -
Sebi19g00025 433 Pfam tify domain 306 337 IPR010399 -
Sebi19g00025 433 MobiDBLite consensus disorder prediction 55 100 - -
Sebi19g00025 433 ProSiteProfiles Tify domain profile. 303 338 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi19g00025 Sebi-Chr19 1167344 1174736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi19g00025 6 336 Tify Gene Family AT4G32570 36.686 1.59e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sebi19g00025 tify 1.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi19g00025 - - gmx:100819293 542.732