Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi19g00018 ATGGATTTTCAGGTATGCAAAATGAATAAAGAAAACGCTGCAGTTTGTGGTGTACGCGTCACTCGAGCAAGGGCTAGAGCCTTGGAAGGGGTATCTGCCTCCTCAAGACCCTCCTTCAAGAAGAAACACAAAAACGACGTAGTTCTTGGACTAAGCTCCAATGTACCTGCTGCCGATAAGAGCAGAGCAGTGCTAACAGATGTAACTAACATACGCAGAAAACCAAACGATAAGCGTATTAAGGCTTCAAAATCTCAGATAAGAGGAGGTTATAAGAAGAGAAACACAAAGGCAGGTTCAGATCATGTATCCAAACAAGTTTTGTCAATCCAAGAGGATGTTAGAGCAAAGATGGCTAAAGATTTATCCACAACAACAGTGGTGGAGTCAAATGACATCGCAGCACAAAGGGTGGGAAGCAGAGAGCCACTGCAGCGTTGTAGCATGAGAGAACCTGTTATGGCATATCCCCTGCTTTCAGTGCAGGACTCTCTGATGTCTGATGAACAACTTTGCTCTCCAAATAAAGACATAGATATGATTTGTGAGAAACGAAGAGCCTTAGATGGCTTGCACGTTGTGGATATTGACTCAGAGTTAAAGGATCGTCAAGTTTGGAGTTCATATGCCCCTGATATATACAATAATATACGTGTCAGAGAGTGTGAAAGAAGACCGTTAACCAATTACATGGACAAGTTACAGCAAGATATCACTCCGATCATGCGGGGAATTCTGGTTGATTGGCTTGTGGAGGTTTCTGACGAATATAATCTAGTTCCAGACACACTTTACCTTGCAGTGAATCTCATTGATCGGTTTCTTTCTAAAAGTTTAATTCAGAAACAGAGGCTCCAGTTGCTTGGTGTTACTTGCATGCTTATTTCATCAAAGTATGAAGAGATTGTGGCTCCTCGAGTGGAAGATTTTTGCTTCATCACTGATAATACATACACGAAAGCAGAGGTATTGAAAATGGAGACTGAGGTTCTAAATCTTCTGTATTTTCAATTATCTGTTCCCACAATCAAAACATTTCTCAGGAGATTCATCCAAGCAGCACAATCTTCTTACAAGGTTCCTTATGTTGAGCTGGAATTCCTGGCAAATTATTTAGCAGAGCTTACTCTTGTTGAATACAGCTTCTTGCAGTTTCTACCTTCCTTGATAGCTGCGTCTGCTGTATTACTTGCCAGATGGACCCTCAACCAGTCAGAACATCCATGGAATCCAACTCTGGAGCACTACACAAATTACAAATCGTCAGAGCTTAAAACTACTGTCGTTGCACTGGCAGATTTGCAACTTAATACCAAAGGCTGTTGTCTTAATGCTATACGTGAAAAATATAAACAAGAGAAGTTCAAGGGTGTGGCAAATTTGCCTCCAATACCAGTGGAGTCACTTTTCTAG 1413 0.4133 MDFQVCKMNKENAAVCGVRVTRARARALEGVSASSRPSFKKKHKNDVVLGLSSNVPAADKSRAVLTDVTNIRRKPNDKRIKASKSQIRGGYKKRNTKAGSDHVSKQVLSIQEDVRAKMAKDLSTTTVVESNDIAAQRVGSREPLQRCSMREPVMAYPLLSVQDSLMSDEQLCSPNKDIDMICEKRRALDGLHVVDIDSELKDRQVWSSYAPDIYNNIRVRECERRPLTNYMDKLQQDITPIMRGILVDWLVEVSDEYNLVPDTLYLAVNLIDRFLSKSLIQKQRLQLLGVTCMLISSKYEEIVAPRVEDFCFITDNTYTKAEVLKMETEVLNLLYFQLSVPTIKTFLRRFIQAAQSSYKVPYVELEFLANYLAELTLVEYSFLQFLPSLIAASAVLLARWTLNQSEHPWNPTLEHYTNYKSSELKTTVVALADLQLNTKGCCLNAIREKYKQEKFKGVANLPPIPVESLF 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi19g00018 470 SMART cyclin_7 248 332 IPR013763 -
Sebi19g00018 470 SMART cyclin_7 345 433 IPR013763 -
Sebi19g00018 470 PANTHER CYCLINS 172 452 IPR039361 -
Sebi19g00018 470 CDD CYCLIN_AtCycA-like_rpt2 341 455 - -
Sebi19g00018 470 SMART Cyclin_C_2 341 464 IPR004367 -
Sebi19g00018 470 Pfam Cyclin, C-terminal domain 341 463 IPR004367 -
Sebi19g00018 470 Gene3D - 212 460 - -
Sebi19g00018 470 SUPERFAMILY Cyclin-like 202 338 IPR036915 -
Sebi19g00018 470 MobiDBLite consensus disorder prediction 82 101 - -
Sebi19g00018 470 FunFam Mitotic cyclin 6 226 326 - -
Sebi19g00018 470 Pfam Cyclin, N-terminal domain 212 338 IPR006671 -
Sebi19g00018 470 PIRSF Cyclin_A_B_D_E 20 468 IPR046965 GO:0016538|GO:0044772
Sebi19g00018 470 ProSitePatterns Cyclins signature. 243 274 IPR006671 -
Sebi19g00018 470 Gene3D - 226 339 - -
Sebi19g00018 470 FunFam Cyclin A1 328 460 - -
Sebi19g00018 470 SUPERFAMILY Cyclin-like 340 464 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi19g00018 Sebi-Chr19 827048 831651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi19g00018 17 470 Core Cell Cycle Gene Families AT5G25380 52.146 1.16e-145 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi19g00018 K06627 - gmx:100777132 614.379